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berkeley_reactor_200306_biofilm_scaffold_66949_11

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(10158..10667)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, PadR family n=2 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q09DY3_STIAD similarity UNIREF
DB: UNIREF100
  • Identity: 63.8
  • Coverage: 188.0
  • Bit_score: 219
  • Evalue 1.30e-54
PadR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 63.8
  • Coverage: 188.0
  • Bit_score: 219
  • Evalue 3.70e-55
Transcriptional regulator, PadR family {ECO:0000313|EMBL:EAU69926.1}; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigmatella.;" source="Stigmatella aurantiaca (strain DW4/3-1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.8
  • Coverage: 188.0
  • Bit_score: 219
  • Evalue 1.80e-54

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Taxonomy

Stigmatella aurantiaca → Stigmatella → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 510
ATGCGGCAGGGACACGACCCCTTCCCCGATCCCGACGACCCCGGTCGCCCTCACGGCCGTCACCGCGGACGCCTCTTCGACTATGGCGAGCTGCGCCTCCTCCTGCTGGCGATGATCGCCGAGCGGCCGCGGCACGGCTACGAGCTGATCAAGGCGATCGAGGAGCGCTTCGGCGGCAGCTATGTGCCGAGCCCGGGGGTGATCTACCCCACCCTCGCCTGGCTCGACGACATGGGCTACGCCGCCCTCGAAGCCGAGGCGGCCGGCCGCAGGCTGTGCCGCATCACGGCCGAGGGCGAGGCCTTCCTCGTCGCCAACCGGGCGGCGGCCGATGCCCTGCTCGCCCGCGCCGGCCCCGGCGAGGTGCCGGCGCCGGTGCTGCGGGCGATGGAGAACCTGAAATTCGCGCTGCGTCTGCGCCTGCGGCAGGGTCCGCTCGACGAGACGGCAGCCGATGCGATCGCCGCGGCGCTCGATGTCGCGGCCCGAGCCGTGGAGAAAAGCCGATGA
PROTEIN sequence
Length: 170
MRQGHDPFPDPDDPGRPHGRHRGRLFDYGELRLLLLAMIAERPRHGYELIKAIEERFGGSYVPSPGVIYPTLAWLDDMGYAALEAEAAGRRLCRITAEGEAFLVANRAAADALLARAGPGEVPAPVLRAMENLKFALRLRLRQGPLDETAADAIAAALDVAARAVEKSR*