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berkeley_reactor_200306_biofilm_scaffold_66949_17

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 20079..20330

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UZ45_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 71.0
  • Coverage: 69.0
  • Bit_score: 104
  • Evalue 4.00e-20
Msl1110 protein similarity KEGG
DB: KEGG
  • Identity: 53.7
  • Coverage: 82.0
  • Bit_score: 107
  • Evalue 1.70e-21
Uncharacterized protein {ECO:0000313|EMBL:GAK71192.1}; TaxID=1220582 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rubi NBRC 13261.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.1
  • Coverage: 78.0
  • Bit_score: 107
  • Evalue 6.60e-21

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Taxonomy

Agrobacterium rubi → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 252
ATGCACAGGCCGAGGATCCGATTCGGCGAGCGGCATGTCCACCTGCCGCGGTCGCGGGCGCTGCGGCTGCTGGTCGGCGGGCTGTTCGTCGCCGGCGGCCTGCTCGGCTTCCTGCCGATTCTCGGCTTCTGGATGGTGCCGCTCGGGCTGCTGATTCTCTCGGTCGACGTGCCGGTGGTGCGGCGCTGGCGCCGGCGGGCGGCGGTGTGGTGGGCGCGGCGGCGACGCGCCCGGCAGGGCCTCAGGCCTTGA
PROTEIN sequence
Length: 84
MHRPRIRFGERHVHLPRSRALRLLVGGLFVAGGLLGFLPILGFWMVPLGLLILSVDVPVVRRWRRRAAVWWARRRRARQGLRP*