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berkeley_reactor_200306_biofilm_scaffold_66949_18

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(20320..22134)

Top 3 Functional Annotations

Value Algorithm Source
poly(3-hydroxyalkanoate) polymerase n=1 Tax=Pannonibacter phragmitetus RepID=UPI0003742FFE similarity UNIREF
DB: UNIREF100
  • Identity: 69.1
  • Coverage: 586.0
  • Bit_score: 853
  • Evalue 1.10e-244
poly(R)-hydroxyalkanoic acid synthase similarity KEGG
DB: KEGG
  • Identity: 66.9
  • Coverage: 605.0
  • Bit_score: 842
  • Evalue 4.20e-242
Poly(R)-hydroxyalkanoic acid synthase, class I subfamily {ECO:0000313|EMBL:ADZ71085.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.9
  • Coverage: 605.0
  • Bit_score: 842
  • Evalue 2.10e-241

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Taxonomy

Polymorphum gilvum → Polymorphum → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1815
ATGGACAAGGACAGGAAACCGCCCGAGGACCCCTTCACCTTCGCCGGCGGCGATATCGAAGCGCTCTCGCGCAACATCGCCCGCGCCATCGAGGAGGGCGGCAAGGCGATGGCGGCCTATCTGCGCCCGCGCGAGGACGGGCGGGTGAAGACCGGCCTTACCGACGAGATCGCCGACGCGGTCAAGACCTTCGGCCATCTCGCCGAATACTGGATGAAGGACCCGCAGCGCGCCGTGGAGGCGCAGTCGCGCCTCGCCTCCGGCTTCATGGAGCTGTGGGCCTCCTCGCTCAAGCGCATGGCCGGCGAGCCGGCCGCGCCCGCGGCCGCGCCGGACCCGCGCGACCCGCGCTTCAAGGCGCCGGAATGGAGCGAGAACCAGTTCTTCGACGTGATCAAGCAGGCCTATCTCATCACCACGCGCTGGGCCGACAAGCTGGTGAAGGACGCCGAGGGCCTGGAGCCGCACATGAAGCACAAGGCGGACTTCTATGTCCGCCAGCTCTCGGCCGCGCTCTCGCCCTCCAACTTCATCGCCACCAACCCGGAGCTGATCCGGCAGACCCTGGCCGAGAACGGCGAGAACCTGGTGCGCGGGCTGCACATGCTGGCCGAGGACATCGCCGCCGGCCAGGGCGACCTCAAGCTGCGCCAGTCCGACGCCTCCAAGTTCGAGGTCGGCGTCAACCTGGCGCTCACCCCGGGCAAGGTTGTGTTCCGCAACCAGACCATGGAGCTCCTGCAATACGCGCCGGCCACCGAGACGGTCTACCAGCGCCCGCTGCTGATCTGCCCGCCCTGGATCAACAAGTTCTACATCCTCGATCTCAACCCGGAGAAGAGCTTCATCCGCTGGTGCGTCGAGCAGGGGCTCACCGTCTTCGTCATCTCCTGGGTCAATCCCGGCCCGGAGCAGCGCCGCAAGGGCTTTGCCGAATATATGCGCGAGGGCCCGCTCGCGGCCCTGGACGAGATCCGCAAGATCACCGGCGAGACCGACGTCAGCGCCATCGGCTATTGCGTCGGCGGCACCCTGCTCTCGGTGACGCTGGGCTGGATGGCGGCGCAAGGCGACCGGCGCATCGCCTCGGCGACGCTGTTCGCCACCCAGGTCGACTTCACCCATGCCGGCGACCTGAAGGTGTTCGTCGACGAGGAGCAGATCCAGGCGGTGGAGCGCAAGATGGCCGAGCACGGCTATCTCGCCGGCTCGAAGATGGCCGCCGCCTTCAACATGCTGCGCAGCCAGGACCTGATCTGGCCCTACGTGGTCAACAATTATGTGCGCGGCAAGCAGCCCTTCCCCTTCGACCTGCTCTACTGGAATTCCGATTCCACCCGCATGCCCGAGGCGAACCACTCCTTCTATCTCCGCTACTGCTACCTGGAGAACCGCCTCAGCCGGGGCCGCATGGAGATCGACGGCGCGCCCGTGGACCTGAAGAAGGTGACGATCCCGATCTACAACCTGGCGACGCGCGAGGACCATATCGCCCCGCCCAAGTCGGTTTTCGTCGGCTCCGCCGCCTTCGGCGGCCCGGTGCGCTATGTCCTGACCGGCTCGGGCCACATCGCCGGGGTGATCAACCCACCGGCCAAGGGCAAGTACCAGTACTGGCTCGGCGGCCCGCCCGAGGGCGCCTACGAGGACTGGCTCGCCGGCGCACAGGAGCATCCCGGCTCCTGGTGGCCGGACTGGCTCGCCTGGCTGACCGCGCAGGCGCCCGAGCGCATCGCGGCGGCGAAGCGCAAGCCCGGCGGCCGGAGGAAGCCGCTGGGCGAGGCGCCCGGCAGCTATGTGAAGATCAAGGCCTGA
PROTEIN sequence
Length: 605
MDKDRKPPEDPFTFAGGDIEALSRNIARAIEEGGKAMAAYLRPREDGRVKTGLTDEIADAVKTFGHLAEYWMKDPQRAVEAQSRLASGFMELWASSLKRMAGEPAAPAAAPDPRDPRFKAPEWSENQFFDVIKQAYLITTRWADKLVKDAEGLEPHMKHKADFYVRQLSAALSPSNFIATNPELIRQTLAENGENLVRGLHMLAEDIAAGQGDLKLRQSDASKFEVGVNLALTPGKVVFRNQTMELLQYAPATETVYQRPLLICPPWINKFYILDLNPEKSFIRWCVEQGLTVFVISWVNPGPEQRRKGFAEYMREGPLAALDEIRKITGETDVSAIGYCVGGTLLSVTLGWMAAQGDRRIASATLFATQVDFTHAGDLKVFVDEEQIQAVERKMAEHGYLAGSKMAAAFNMLRSQDLIWPYVVNNYVRGKQPFPFDLLYWNSDSTRMPEANHSFYLRYCYLENRLSRGRMEIDGAPVDLKKVTIPIYNLATREDHIAPPKSVFVGSAAFGGPVRYVLTGSGHIAGVINPPAKGKYQYWLGGPPEGAYEDWLAGAQEHPGSWWPDWLAWLTAQAPERIAAAKRKPGGRRKPLGEAPGSYVKIKA*