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berkeley_reactor_200306_biofilm_scaffold_56669_10

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(12415..14865)

Top 3 Functional Annotations

Value Algorithm Source
penicillin-binding protein 1A (EC:2.4.1.129) similarity KEGG
DB: KEGG
  • Identity: 66.9
  • Coverage: 831.0
  • Bit_score: 1122
  • Evalue 0.0
hypothetical protein n=1 Tax=Methylopila sp. M107 RepID=UPI00036A6316 similarity UNIREF
DB: UNIREF100
  • Identity: 69.0
  • Coverage: 825.0
  • Bit_score: 1130
  • Evalue 0.0
Penicillin-binding protein {ECO:0000313|EMBL:KIZ38826.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.1
  • Coverage: 830.0
  • Bit_score: 1133
  • Evalue 0.0

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Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2451
ATGCGATTTCTGGTTCGATTCCTTGGATTCCTGTTTTCGACGGGCTCGCTTCTGGCGCTCGTCGGCGCGACGGTCGTCGGCTATGTCGTCTGGGCCAACACCCGCGACCTGCCCGACTACTCGCAGCTGCAGGACTACGAGCCGCCCGTGATGACGCGCGTGCATGCCGGCGACGGCACGCTGCTCGCCGAATACGCCAACCAGCGCCGCCTCTACCTGCCGATCCAGGTGGTGCCTCCGCTGGTGATCCACGCCTTCATCTCGGCCGAGGACAAGAATTTCTACACCCATAGCGGCGTCGACCCCGAGGGCGTGCTGCGCGCCGTCATCACCAATTTCCAGAACCGCGGCTCGGGCAAGCGGCCGCAGGGCGCCTCCACCATCACCCAGCAGGTGGCCAAGAACTTCCTCCTGACCCCGGACGCCAGCTATGTCCGCAAGATCAAGGAAGCGCTGCTGGCGCTGCGCATCGAGCAGACCTATTCCAAGGACAAGATCCTCGAGCTCTACCTCAACGAGATCTATCTCGGCATGGGCAATTACGGGATCGCGGCCTCGGCGCTCAACTATTTCGGCAAGTCCGTCAACGAGCTGACTGTGGCGGAGGCCGCCTATCTCGCCGCGCTGCCCAAGGGGCCCAACAACTACCATCCCATCCGCCAGCGCCAGGCGGCGCTCGACCGCCGCAACTGGGTGATCGGCCAGATGGTCGAGAACGGCTATGTCAGCCGCGAGGAGGGCGAGAAGGCCAAGGCCGAGCCGCTCAACGTCGATCCGCGCCTGCTCGACTCGTCGCGCACCTATGCGGCGAGCTATTTCACCGAGGAGGTGCGGCGCGAGATCGCCGAGCGCTACGGCGAGAAGAAGCTCTACGAGGGCGGCCTTTCCGTGCGCACCACGCTGGAGCCCAAGCTCCAGCAGGAGGCGCGCCAGGTGCTCGTCAACGGCATGGTGCGCTACGACGAGGCCCAGGGCTATCGCGGCGCGGTGAAGACCGTCGACCTCTCCGACGACTGGGGCAAGGCGATCGCCGGGGAGAAGCGCCTCGGCGACATCCAGCCCTGGCGCCTGGCCGTGGTGCTGGAATCCGGCGATGCCCAGGCCCGCATCGGCCTGCAGCCGCCGCTCGACAAGTTCGGCAGCCTGTCGAGCGAGCGCCCGACCGGCACCATCACCCTGGACGGCGTCAAATGGGCCAAGGCGGCGCAGGGGCCGCAGCGCGGCCGCGCCGTCTCGAAGGTCAGCCAGGTGCTCAGCCCGGGCGACGTCGTCTATGTCGAGCCGAAGAGCGACGACACCTATCGCCTGCGCCAGATCCCCGAGATATCCGGGGCCATGGTGGTGATGGATCCGCATACCGGCCGCGTCCTGGCGTTGGTCGGCGGCTTCTCCTTCGACCAGAGCGAGTTCAACCGCGCCACCCAGGCGATGCGCCAGCCCGGCTCCTCCTTCAAGCCGTTCATCTACGCGGCGGCGCTCGACAATGGCTACACGCCGTCCTCGGTGGTCATGGATGCGCCGATCGAGATCGACCAGGGCAATGGCGGCGACGCCTGGCGGCCGGAGAACTATGGCGGCAAGTTCTACGGCCCGGAGACCCTGCGCTTCGGCATCGAGTATTCGCGCAACGTCATGACCGTGCGCCTGGCGCAGGACATGGGCATGCCGCTGATCGCCGAATATGCCCGCCGCTTCGGCGTCTATGACGATCTGCCGCCCTATCTCTCCATGGCGCTCGGCGCCGGCGAGACCACGGTGCTGCGCATGACCACGGCCTACGGCATGCTGGCCAATGGCGGACGCAAGCTCAAGCCCACCCTGATCGACCGCATCCAGGACCGCTGGGGCCACACCATCTACAAGCACGACGAGCGCATCTGCGACGGCTGCGACGCGGAGCAATGGTCGAACCAGGACGAGCCCAAGCTGATCGACACCAGCGAGCAGGTGCTCGACCCGATGACCGCCTACCAGGTCACCTCCATGCTCGAGGGCGTGGTGCAGCGCGGCACCGCCACCGTGCTGAAGTCGCTCAACCGGCCGATCGCCGGCAAGACCGGCACGACCAACGACGAGAAGGACGCCTGGTTCGTCGGCTATTCGCCCGACATGCTCTGCGGCCTTTATTTCGGCTACGACAAGCCGCGTCACCTCGGCAACGGCATCACCGGCGGCCATCTCGCCGCGCCGGTGTTCGGCGAGTTCATGAAGCTGGCGCTGGCCGACGTGCCGCCCGTGCCGTTCCGCGTGCCGCCGGGCATCAAGCTGATCCGCATCGACCGCAAGAGCGGCATGCGCGCCAGCGGCGACGGGCCCGGCACCATCCTGGAGGCCTTCAAGCCCGGCACCGCGCCGCCCGACAGCTACTCCGTCATCGGCGGCGGCGCCTCGGCCAGCGTGTCGCCCGAGGCCGACCGTGCCGTGACCACCGGAACCGGCGGGCTCTATTGA
PROTEIN sequence
Length: 817
MRFLVRFLGFLFSTGSLLALVGATVVGYVVWANTRDLPDYSQLQDYEPPVMTRVHAGDGTLLAEYANQRRLYLPIQVVPPLVIHAFISAEDKNFYTHSGVDPEGVLRAVITNFQNRGSGKRPQGASTITQQVAKNFLLTPDASYVRKIKEALLALRIEQTYSKDKILELYLNEIYLGMGNYGIAASALNYFGKSVNELTVAEAAYLAALPKGPNNYHPIRQRQAALDRRNWVIGQMVENGYVSREEGEKAKAEPLNVDPRLLDSSRTYAASYFTEEVRREIAERYGEKKLYEGGLSVRTTLEPKLQQEARQVLVNGMVRYDEAQGYRGAVKTVDLSDDWGKAIAGEKRLGDIQPWRLAVVLESGDAQARIGLQPPLDKFGSLSSERPTGTITLDGVKWAKAAQGPQRGRAVSKVSQVLSPGDVVYVEPKSDDTYRLRQIPEISGAMVVMDPHTGRVLALVGGFSFDQSEFNRATQAMRQPGSSFKPFIYAAALDNGYTPSSVVMDAPIEIDQGNGGDAWRPENYGGKFYGPETLRFGIEYSRNVMTVRLAQDMGMPLIAEYARRFGVYDDLPPYLSMALGAGETTVLRMTTAYGMLANGGRKLKPTLIDRIQDRWGHTIYKHDERICDGCDAEQWSNQDEPKLIDTSEQVLDPMTAYQVTSMLEGVVQRGTATVLKSLNRPIAGKTGTTNDEKDAWFVGYSPDMLCGLYFGYDKPRHLGNGITGGHLAAPVFGEFMKLALADVPPVPFRVPPGIKLIRIDRKSGMRASGDGPGTILEAFKPGTAPPDSYSVIGGGASASVSPEADRAVTTGTGGLY*