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berkeley_reactor_200306_biofilm_scaffold_56669_11

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(15153..16415)

Top 3 Functional Annotations

Value Algorithm Source
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28) similarity KEGG
DB: KEGG
  • Identity: 54.1
  • Coverage: 429.0
  • Bit_score: 424
  • Evalue 3.20e-116
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:ABD88401.1}; EC=3.5.1.28 {ECO:0000313|EMBL:ABD88401.1};; Flags: Precursor;; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.1
  • Coverage: 429.0
  • Bit_score: 424
  • Evalue 1.60e-115
hypothetical protein n=1 Tax=Methylopila sp. M107 RepID=UPI000365791C similarity UNIREF
DB: UNIREF100
  • Identity: 60.5
  • Coverage: 370.0
  • Bit_score: 429
  • Evalue 2.70e-117

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Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1263
ATGCGGCGCTTCTGGACATTGGTGCTTCTGGCTCTTCTCGCGACCGCTTCCGCCGGGCGCGCCGCCGAGACTGCGCCGCCCGCGCCTGCCGCCCCGCCGGCACCGGCCGTCTCTCCGCCGCCCGCCTCGCCCGTCGAGATCCGGGCAACCGATGCACGCCTTGCCGGCGACGCCAGGCGCACGCGTCTGATCATTGATCTTTCATCATCGATCCAGTTCCAGGCCTTCGCCCTGGCCGATCCCTACCGCGTCGTGGTCGACCTGCCGCAGATCACCTTCGCCATGCCCGGCGACATCGGCCGGAAGGGCAGGGGCCTGGTGTCGGCCTATCGCTTCGGGCTGATCGCGCCCGGCAAGTCGCGCCTGGTGCTCGACCTCGCCGGCCCGGCGGCGATCGACAAGGCCTTCATCATCCCGGCCGCCGGCGACCCGCCGGCGCGCCTGGTCGTCGATCTCGTCAAGAGCGACCGGGCCGTGTTCCTGCAGGAGGTCGCGGCGCAGCAGAAGGCGGCCGCGCCGCCCGCGCCGTCGGAGGCTCCGCTGGTCAAGCCGGCCGGCCCGCCGGTGGTGGTGCTCGATCCCGGCCACGGCGGCATCGACACCGGTGCGGTCACGCCGACCGGCGAGCAGGAGAAGACCATCGTGCTCGACTTCGCCAGGATGCTGGCCAAGAAGCTGGAGGCGAGCGGGCGCTACAAGGCGGTGCTGACCCGCGACGACGACACGTTCGTCACCCTGGCCGGGCGCATCGACATCGCGCGGCAGAAGGGGGCGGCGCTGTTCGTCTCGATCCATGCCGACACCCTGCCCGATCCGTTCGGCGTGCGCGGGGCGACCATCTACACTCTGTCCGACAAGGCCTCCGACGCCGAGGCGGCGCGCTATGCGGAGAAGGAGAACCGGGCCGACGCCATCGCCGGCGTCGACCTCTCGGGCGAGCCCGACGACGTCGCCGACATCCTGATCGACCTGACCCGCCGGGAGACCAAGTCGTTCTCCAACCAGTTCGCCAAGATCCTGATCGACGAGTTCCAGGCTGCCGCGGCCCTCAACAAGAATCCGCACCGCTCCGCCGGCTTCCGCGTGCTCAAGGCGCCTGACGTGCCCTCGGTGCTGCTGGAGCTCGGCTATCTCTCCAACAAGCAGGACGTGAAGCTGCTGACCTCCGACGACTGGCGGGCCCACGCCACAGACGCGGTGATGGCGGCGATCGATTCGTTCTTCGCCGCCCGGCAACGTGACATTCGCGCCACATCCAACTGA
PROTEIN sequence
Length: 421
MRRFWTLVLLALLATASAGRAAETAPPAPAAPPAPAVSPPPASPVEIRATDARLAGDARRTRLIIDLSSSIQFQAFALADPYRVVVDLPQITFAMPGDIGRKGRGLVSAYRFGLIAPGKSRLVLDLAGPAAIDKAFIIPAAGDPPARLVVDLVKSDRAVFLQEVAAQQKAAAPPAPSEAPLVKPAGPPVVVLDPGHGGIDTGAVTPTGEQEKTIVLDFARMLAKKLEASGRYKAVLTRDDDTFVTLAGRIDIARQKGAALFVSIHADTLPDPFGVRGATIYTLSDKASDAEAARYAEKENRADAIAGVDLSGEPDDVADILIDLTRRETKSFSNQFAKILIDEFQAAAALNKNPHRSAGFRVLKAPDVPSVLLELGYLSNKQDVKLLTSDDWRAHATDAVMAAIDSFFAARQRDIRATSN*