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berkeley_reactor_200306_biofilm_scaffold_56669_36

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(38529..39854)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Methylopila sp. M107 RepID=UPI00035D0DCD similarity UNIREF
DB: UNIREF100
  • Identity: 55.6
  • Coverage: 439.0
  • Bit_score: 444
  • Evalue 8.60e-122
Iron-sulfur cluster assembly protein SufD {ECO:0000313|EMBL:EJW11224.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.0
  • Coverage: 442.0
  • Bit_score: 421
  • Evalue 8.40e-115
FeS assembly protein SufD similarity KEGG
DB: KEGG
  • Identity: 51.4
  • Coverage: 440.0
  • Bit_score: 404
  • Evalue 2.80e-110

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Taxonomy

Rhodovulum sp. PH10 → Rhodovulum → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1326
ATGGCCGAGATCACCGTCATCAAGACCCCGGCCGAGGCGGCGCTGGCCGAAGCCTTCGGCGCGGCGCTCGACGCCCTGCCGGGCACCGCCGCCGTGCGCAGCCTGCGCGAGGAGGCCTTCGGCGCCTTCTCCCGCGCCGGCCTGCCGCATCGCCGCGTCGAGGAGTGGAAATACACCGACCTGCGCACGCTGATGCGCGAGGCCCGGCCGCTCGCCGCCCCGCCCGATGCGATCGCCCTCGACAGGGCGCGCCTGACGTCCGAGGCCCTGCGCCAGCACGCGCATCTGCGCCTGACCCTGGTCGACGGCAGCTTCGCGCCGTCGCTCTCGGATGTCGGGCTGCTGCCCGCGGGCGTGCGCTTCCTGCCGCTCGCCGAGGCGCTGGCCTCGGGCGACGCGCTGGTCGCCGGCCGCCTCGGCGCCCAGGCGGTGGACAATGCGGCGGTGGCGCTCAACGCCGCCTTCATGACGGACGGCTTCGTGCTGGCCGTCGACGCCGGCGTCAGCGTCGAGCTGCCGGTGCTGCTCCAGCACGTCCAGACCAGCCCGGAGGGCCGGGCGGTCTATGCCCGCTCGCTGATCGTGCTGGGCGAGGGTGCCTCGCTCACCCTGGTCGACACCTATGAGGGGGCCGAGGGCGCCGCCAATCAGACCAACATCGTCATCGAGGTCTCCCTCGGCGACCGCGCCCGGCTGGAGCGCATCGCCATCCAGACCGAGAGCCTGCAGACCCTGCACCTCGCCACGCTGACCGCCTCGCTCGGGGCTCGGGCGGAGCTCGTCAGCTTCGCCCTCGGTGCCGGCGCGGCGGTGGCCCGGAGCCAGCTCTTCGTCGCCTATGCCGGCGACCACGCCACCGCCTCCCTCGGCGGCGCCACGCTGCTGGCGGGCAAGCGCCATGCCGACACCACGCTGGTGGTCGACCATGCCGCCCTCAACGGCACCAGCCGCGAATTGTTCAAGGCGGTGCTCGACGGCGACAGCCGCTCGGTGTTCCAGGGCAAGATCGTGGTGCGGCCGGGCGCCCAGAAGACCGACGGCAAGATGATGAGCCAGGCCATCCTGCTCTCCGACGGCGCCGAGGTCGACAACAAGCCGGAGCTGGAGATCTTCGCCGACGACGTGGTCTGCGGCCACGGCGCCACCTGCGGCGCCCTGGACGAGGACCTCCTGTTCTACTGCAAGGCGCGCGGCATCCCGCAGGCCGAGGCCGAGGCGATCCTGCTGCAGGCCTTCGTCGGCGAGGCGGTCGAGGCGATCGGCAGCGAGGCGGTGCGGGGTGGCGTGATGGCCATCGCCGAGCGCTGGCTCGCCGCCCGGGTGTGA
PROTEIN sequence
Length: 442
MAEITVIKTPAEAALAEAFGAALDALPGTAAVRSLREEAFGAFSRAGLPHRRVEEWKYTDLRTLMREARPLAAPPDAIALDRARLTSEALRQHAHLRLTLVDGSFAPSLSDVGLLPAGVRFLPLAEALASGDALVAGRLGAQAVDNAAVALNAAFMTDGFVLAVDAGVSVELPVLLQHVQTSPEGRAVYARSLIVLGEGASLTLVDTYEGAEGAANQTNIVIEVSLGDRARLERIAIQTESLQTLHLATLTASLGARAELVSFALGAGAAVARSQLFVAYAGDHATASLGGATLLAGKRHADTTLVVDHAALNGTSRELFKAVLDGDSRSVFQGKIVVRPGAQKTDGKMMSQAILLSDGAEVDNKPELEIFADDVVCGHGATCGALDEDLLFYCKARGIPQAEAEAILLQAFVGEAVEAIGSEAVRGGVMAIAERWLAARV*