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berkeley_reactor_200306_biofilm_scaffold_56669_43

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 45479..46747

Top 3 Functional Annotations

Value Algorithm Source
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00009759}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716};; Tyrosine--tRNA ligase; Tyrosyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02006}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.1
  • Coverage: 422.0
  • Bit_score: 581
  • Evalue 7.90e-163
Tyrosyl-tRNA synthetase (EC:6.1.1.1) similarity KEGG
DB: KEGG
  • Identity: 67.8
  • Coverage: 422.0
  • Bit_score: 574
  • Evalue 1.50e-161
Tyrosine--tRNA ligase n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BQQ7_GRABC similarity UNIREF
DB: UNIREF100
  • Identity: 67.5
  • Coverage: 422.0
  • Bit_score: 573
  • Evalue 1.50e-160

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Taxonomy

Acidisphaera rubrifaciens → Acidisphaera → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1269
ATGCCGAACAGCGCGTTTCTCCAGGAAGCCCTCGCACGCGGCTTCGTCCACCAGTGCACCGACCCCGAGGCGCTTGACGCCGCCCTGGGGGCGGGGACCGTCGCCGGCTATATCGGCTTCGACTGCACGGCGCCGAGCCTGCATGTCGGCAGCCTGGTGCAGATCATGCTGCTGCGCCTGATGCAGCGGCATGGTCATCGTCCGGTGGTGCTGATGGGCGGCGGCACGACGCGGATCGGCGACCCCTCCGGCAAGGACGAATCGCGCCAGCTTCTCTCCGATGCCGACATCGCCGCCAACATGGCCGGCATCCGCCGCGCGTTCGATCCGTTCCTGGATTTCGCCGGCCCCGCCGCGGCGCTGATGGCGAACAACGCGGACTGGCTCGACCGGCTCGGCTACATTCCGCTGCTGCGCGACGTGGGCGTGCATTTTTCGGTCAACCGCATGCTCGGCTTCGACAGCGTGCGGCTGCGGCTGGAGCGCGAGCAGCCGCTGACCTTCCTCGAATTCAACTACATGATTCTGCAGGCCTACGATTTCCGCGAGCTGTATCGCCGCCACGGCGTGCGGCTGCAGATGGGCGGGTCGGACCAGTGGGGCAACATCGTCTGCGGCATCGACCTCGTGCGCCGCACCGAGCAGGCCGAGGTGTTCGGACTGACCACGCCGCTGATCACCACCGCGTCCGGCGCCAAGATGGGCAAGACGGCGCGGGGCGCGGTGTGGCTCACAGCCGACCGCGTCAGCCCCTACGAATACTGGCAGTTCTGGCGCAACGCCGACGATGCCGATGTCGGGCGGTTCCTGCGCCTGTTCACCGACGTGCCGCTGGACGAGATCGCGCGGCTGGAGGCGCTGGGCGGGGCGGAGATCAACGCGGCAAAGAAGGTTCTCGCGACCGAGGCGACGGCGCTCGCGCATGGACGCGAAGATGCTAATCGCGCCGCCTCTTCCTCCGAAACTGTCTTCGCATCAGGCAATATAACGTTTGCATTGGGTGTCACTGGCTCTGCGGAAATGCTTCCGACGGTGCCAGTCGCGCGCTCCGAGCTGGAGAAGGGCATTCCTGCATTTCAGTTGTTCGCGGTGTCTGGACTCGTGGCGTCGGGTAGCGCGGCAAGGCAACTAATCCGCGGTGGCGGTGCACGGGTGAACGATCAGGCGATTACCGATGAGCGCCAGCCGCTTACCCTCGCCGATCTGCGTGACGGCGTGTTGAAACTTTCGGCGGGGCGCAAGCAGCATCGCCTTGTTCGCCCTCACCCC
PROTEIN sequence
Length: 423
MPNSAFLQEALARGFVHQCTDPEALDAALGAGTVAGYIGFDCTAPSLHVGSLVQIMLLRLMQRHGHRPVVLMGGGTTRIGDPSGKDESRQLLSDADIAANMAGIRRAFDPFLDFAGPAAALMANNADWLDRLGYIPLLRDVGVHFSVNRMLGFDSVRLRLEREQPLTFLEFNYMILQAYDFRELYRRHGVRLQMGGSDQWGNIVCGIDLVRRTEQAEVFGLTTPLITTASGAKMGKTARGAVWLTADRVSPYEYWQFWRNADDADVGRFLRLFTDVPLDEIARLEALGGAEINAAKKVLATEATALAHGREDANRAASSSETVFASGNITFALGVTGSAEMLPTVPVARSELEKGIPAFQLFAVSGLVASGSAARQLIRGGGARVNDQAITDERQPLTLADLRDGVLKLSAGRKQHRLVRPHP