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berkeley_reactor_200306_biofilm_scaffold_65599_23

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 20201..20572

Top 3 Functional Annotations

Value Algorithm Source
rplA2; protein RplA (EC:4.2.1.42) similarity KEGG
DB: KEGG
  • Identity: 62.4
  • Coverage: 93.0
  • Bit_score: 124
  • Evalue 1.20e-26
RplA {ECO:0000313|EMBL:AEV60948.1}; EC=4.2.1.42 {ECO:0000313|EMBL:AEV60948.1};; TaxID=1114970 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens F113.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.4
  • Coverage: 93.0
  • Bit_score: 124
  • Evalue 5.90e-26
RplA n=2 Tax=Pseudomonas RepID=G8Q9A9_PSEFL similarity UNIREF
DB: UNIREF100
  • Identity: 62.4
  • Coverage: 93.0
  • Bit_score: 124
  • Evalue 4.20e-26

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Taxonomy

Pseudomonas fluorescens → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 372
ATGGCGGCCAGCGCAAGACCCGCAAGGCCATGGGGGACCAGCCTCCTCTCCCTGAGCTTCGCGCTCCTGGCGCTTCCCGCCCTCGCCGCCGATGTCGGCATGGCCTCGTTCTACGGCCGCGAGCATGCCGGCAAGCGCACCGCCGCCGGCGCCCGCTTCAGCATGACGGGCCTCACCGCCGCGCATCGCAGCCTGCCCTTCGGCACCCGCCTCAAGGTGACCAACCTCCGCAACGGCCACAGCGTCGTGGTCGAGGTCGCCGACCGTGGCCCGTTCACGCGCGGGCGCATCATCGACGTCTCCTACGGCGCGGCGCAGGCCCTCGGCTTCGTGCGCGCCGGCGTCACCCGGGTGAAGCTCGAGCGGCTCTGA
PROTEIN sequence
Length: 124
MAASARPARPWGTSLLSLSFALLALPALAADVGMASFYGREHAGKRTAAGARFSMTGLTAAHRSLPFGTRLKVTNLRNGHSVVVEVADRGPFTRGRIIDVSYGAAQALGFVRAGVTRVKLERL*