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berkeley_reactor_200306_biofilm_scaffold_65599_24

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 20900..21265

Top 3 Functional Annotations

Value Algorithm Source
Rare lipoprotein A n=1 Tax=Pseudomonas sp. (strain M1) RepID=L1HXQ9_PSEUO similarity UNIREF
DB: UNIREF100
  • Identity: 54.0
  • Coverage: 126.0
  • Bit_score: 132
  • Evalue 2.00e-28
RplA family lipoprotein {ECO:0000313|EMBL:ETM65786.1}; TaxID=95619 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. (strain M1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.0
  • Coverage: 126.0
  • Bit_score: 132
  • Evalue 2.80e-28
rare lipoprotein A similarity KEGG
DB: KEGG
  • Identity: 53.7
  • Coverage: 121.0
  • Bit_score: 128
  • Evalue 1.10e-27

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Taxonomy

Pseudomonas sp. M1 → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 366
ATGACGTCACTAACGACGACTGTGAAGCTTTGTGCCGTTGCCATCACTGTTGCGGCCTCAGCGGTGCCGGCATTCGCCGGCTCTGTCGGCATGGCATCCTATTACGGCAGAGAGTTTCACGGCCGCCGCTGCGCAGATGGCACGCGGTTCAACATGAACGCCATGACGGCAGCCCATCGCAGCCTGCCCTTCGGCACCAAGCTTTCCGTCACCAACCTGCGCAACGGCCGCTCGGTCGTCGTGCGGGTGTCGGACCGCGGCCCCTTCGTCCGCGGCCGCATGCTCGACCTGTCCTACGGCGCCGCGCGCGCCCTGGACTTCGTGCGCAGCGGCACCGCCAAGGTGAAGATCGAGCGCCTGACCTGA
PROTEIN sequence
Length: 122
MTSLTTTVKLCAVAITVAASAVPAFAGSVGMASYYGREFHGRRCADGTRFNMNAMTAAHRSLPFGTKLSVTNLRNGRSVVVRVSDRGPFVRGRMLDLSYGAARALDFVRSGTAKVKIERLT*