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berkeley_reactor_200306_biofilm_scaffold_73177_3

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 3368..4927

Top 3 Functional Annotations

Value Algorithm Source
TROVE domain protein n=1 Tax=Methylosinus trichosporium OB3b RepID=D5QWR0_METTR similarity UNIREF
DB: UNIREF100
  • Identity: 70.5
  • Coverage: 519.0
  • Bit_score: 727
  • Evalue 7.80e-207
Ribonucleoprotein {ECO:0000313|EMBL:EHH12548.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.1
  • Coverage: 519.0
  • Bit_score: 718
  • Evalue 3.90e-204
TROVE domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 66.5
  • Coverage: 519.0
  • Bit_score: 688
  • Evalue 1.50e-195

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Taxonomy

Mesorhizobium amorphae → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1560
ATGGCCAACAAGTCCGTCTTCGCATCCTTCGTGGGCAGGATGCTGCCCGGCGCCGCCGACCGCAATCGGGAGGGCGCGCCGGCCTATGCGCTCACGCCGAAGCACCGGCTGGCCCAGCTCGCCATGACCGGGACGCTCAACGGCACCTTCTATGCCGAGGCAGAGGCCCAGCTCACCGACGTGCTGGCGGCGGCTGCGGCGGTCGAGCCGGGCTTCATCGCCCGCACGGCGGTCCATGCCCGCGAGAAGGGGCACATGAAGGACATGCCGGCGCTCTTGCTGGCGCTGCTCTCGACGCTGGCGTCGCCGGAGTTCCCGGCCGCCTTCGTCCGCGTCGTCGACAACGGCCGCATGCTGCGCAACTTCGTGCAGGTGATGCGGTCGGGCGCCGTCGGGCGCAAGTCCCTCGGGACCCGCCCGAAGAAGCTGGTGCAGGCGTGGCTGGAGCAGGCCTCGGCGATCGAGATCATGCGGGCGGCGGTGGGGCAGGATCCCTCGCTCGCCGACGTGATCAAGATGGTGCATCCCAAGCCGCGGGACGCCGAGCGCGCCGCGCTCTACGCCTGGCTGATCGGGCGGCCCTACGACGTCGGCGCGCTGCCGGCGGTCGTCGCGGCGTTCGAGGCCTTCAAGCGCGACGCCACGGCGCCGGTTCCCGACGTGCCGTTCCAGATGCTCACCGCGCTCCCGCTCACCCGGGAGCACTGGGCGGCCATCGGGCGGCAGGCCGGGTGGCACATGCTGCGGATGAACCTCAACACCTTCGCGCGCCACGGCGCGTTCGAGGTCGAGGGATTCGCCCGGCACGTGGCGCGGCGGCTGGCCGATGCCGAGGCGATCCGTCGGGCGCGGGTGTTCCCGTACCAGCTCATGGCAGCCTATGCCATGGCCGGGACGGGCGTCCCCGCCGCGGTGCGCGAGGCGCTGCAGGACGCGATGGAGGTCGCGGTGGCCAACGTGCCCGCCGTGGCCGGCCGCGTGGTCGTGTGCCCCGACGTGTCGGGCTCGATGGGTTCGCCCGTCACCGGCACCCGCAAGGGCGCGACTTCGAGCGTGCGTTGCATCGACGTCGCGGCCCTGGTGGCGGCGGCGTTCCTGCGGGCGAACCGCTCGGCGCGGGTCGTGCCGTTCGAGCAGGAGGTGGTCGAGATCGGCCTCAACCCGCGCGATTCGGTGATGACCAACGCGGCTCGCCTGGCGGCGATCGGCGGCGGCGGCACCAACTGCTCGGCGCCGCTGGCCAAGCTGGCGGCGGAGCGCGCCAAGGTCGACCTCGTCGTGTTCGTCTCGGACAACCAGTCCTGGGTCGACGCGACGAGCACGCCGCGGCGCGGGACGGCGATGATGCAGGCCTGGGACGTCCTGAAGAGGTACAACCCGAAGGCGCGCCTGGTCTGCATCGATCTCCAGCCCTACGGCACGACGCAGGCGCAGGAGCGTCGGGACATCCTCAACGTCGGCGGCTTCTCCGACGCGGTGTTCGACGTGATCGCGGCCTTCGCCCGGGGCGAGCTCGGCGCAAAGCACTGGGTGGGCGAGATCGAGCAGATCTCGCTCTGA
PROTEIN sequence
Length: 520
MANKSVFASFVGRMLPGAADRNREGAPAYALTPKHRLAQLAMTGTLNGTFYAEAEAQLTDVLAAAAAVEPGFIARTAVHAREKGHMKDMPALLLALLSTLASPEFPAAFVRVVDNGRMLRNFVQVMRSGAVGRKSLGTRPKKLVQAWLEQASAIEIMRAAVGQDPSLADVIKMVHPKPRDAERAALYAWLIGRPYDVGALPAVVAAFEAFKRDATAPVPDVPFQMLTALPLTREHWAAIGRQAGWHMLRMNLNTFARHGAFEVEGFARHVARRLADAEAIRRARVFPYQLMAAYAMAGTGVPAAVREALQDAMEVAVANVPAVAGRVVVCPDVSGSMGSPVTGTRKGATSSVRCIDVAALVAAAFLRANRSARVVPFEQEVVEIGLNPRDSVMTNAARLAAIGGGGTNCSAPLAKLAAERAKVDLVVFVSDNQSWVDATSTPRRGTAMMQAWDVLKRYNPKARLVCIDLQPYGTTQAQERRDILNVGGFSDAVFDVIAAFARGELGAKHWVGEIEQISL*