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berkeley_reactor_200306_biofilm_scaffold_87643_3

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(1120..1743)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator n=1 Tax=Phyllobacterium sp. YR531 RepID=J2VHH6_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 63.1
  • Coverage: 198.0
  • Bit_score: 266
  • Evalue 2.00e-68
Transcriptional regulator {ECO:0000313|EMBL:EJM99439.1}; TaxID=1144343 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Phyllobacterium.;" source="Phyllobacterium sp. YR531.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.1
  • Coverage: 198.0
  • Bit_score: 266
  • Evalue 2.80e-68
TetR family similarity KEGG
DB: KEGG
  • Identity: 37.4
  • Coverage: 190.0
  • Bit_score: 132
  • Evalue 1.30e-28

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Taxonomy

Phyllobacterium sp. YR531 → Phyllobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 624
ATGAGCGGGGCCGCCAGGAAGAAGCCGATCGAGGAAGTGCGCCGCCGCGAGCTGATCGAGGGCGCCTATCGGGTGTTCCTGGAGCACGGCCTCGGCGGCCTGACGACGGCACGGATCTGCCGCGAGGCCGGCATGTCGCCCGGCCTCCTCATCTATTATTTCAAGAGCAAGGACGAGGTGCTGTTCTGGATGGTCCGCCACGCCAACCGTGTCATCATGGACGAGGTGGTGCGCCGGATGAAGGCGGCGGCAAACCGCTGGGACCGCCTGATGGCGATCGTCTCGGGCAACTTCCCGGCCGACCTGTTCGACCGCAACACCGCCAATGCCTGGGTGTCGTTCTATGCCGCGGCGGCGCACGACGCGCAGCTGGCGCGCCTGCAGACGCTGTTCCACCGGCGCCTGGCGTCAAATCTGGCGAGCTGCGTCGACCCGCTGCTGGACGGCGCCGAGCTGGCGCGGTTCACGCTCGGTATCGGTATCCTGATCGACGGTGCCTGGCTGAGGAAGGGCGCCGCCGGCGTCGAGATGACGTCGGCGGACGCGATCGGACTGATCGAGAGCCACATCCGCTGCAGCCTGGGCGAGGTGGGCGTCGCGCGCCTGCGGCAGATGCCGTCATAG
PROTEIN sequence
Length: 208
MSGAARKKPIEEVRRRELIEGAYRVFLEHGLGGLTTARICREAGMSPGLLIYYFKSKDEVLFWMVRHANRVIMDEVVRRMKAAANRWDRLMAIVSGNFPADLFDRNTANAWVSFYAAAAHDAQLARLQTLFHRRLASNLASCVDPLLDGAELARFTLGIGILIDGAWLRKGAAGVEMTSADAIGLIESHIRCSLGEVGVARLRQMPS*