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berkeley_reactor_200306_biofilm_scaffold_87643_6

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 4060..4650

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, TetR family protein n=1 Tax=Rhodospirillum photometricum DSM 122 RepID=H6SLG1_RHOPH similarity UNIREF
DB: UNIREF100
  • Identity: 39.8
  • Coverage: 206.0
  • Bit_score: 107
  • Evalue 1.40e-20
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 39.8
  • Coverage: 206.0
  • Bit_score: 107
  • Evalue 4.10e-21
Transcriptional regulator, TetR family protein {ECO:0000313|EMBL:CCG08826.1}; TaxID=1150469 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Pararhodospirillum.;" source="Rhodospirillum photometricum DSM 122.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 39.8
  • Coverage: 206.0
  • Bit_score: 107
  • Evalue 2.00e-20

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Taxonomy

Pararhodospirillum photometricum → Pararhodospirillum → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 591
ATGGACCAGGTGCAGGATCATCAGGAGGAGCGCTGGCGCGACCTGCGCCGCGCCCGCCTGCTGGAAGCGGCGCGGCGGGTCTTCGCCCGGCTCGGCTACGAGGCCGCGACGGTCGACGACATCGCCTTCGAGGCCGGCATCGGCAAGCCGACGATCTACCGCTATTTCGAGGGCAAGGAGGCGCTGTTCGAGGCTGTCTTCGCCCAGACTCTCGACGACCTCGAAGCCCGCCTCGATGCGGCGCTCGCCGTGCCCGGCCCGATGGCCGAACGCCTCTCCCGCCTCGTCGGCGAGATGGTGCCGACCTTCCGCGACCACATCGTGCCGATGCGCGACCTCAGCGGCGGCGAGACTTGGAAGCGCCGGGTGTTCCGCCCACGCCGGGCCCGCATCGCCGCCCGCCTCGCCGGCGTCATCGCCGAGGGCCAGGCGGCCGGCGAGGCACGTGCCGTCGATCCCGCCGTCGCGGCCCGCTTCCTGATCGGCCTGGTCTGGAGCGGCACCAATTCCGACCTCGCCGGCGATGCCGAGATCACCGCCGCGATCGTCGACTTCGCCTTCCGGGGCCTGGCGCCGGAGGGGCGGCCGTGA
PROTEIN sequence
Length: 197
MDQVQDHQEERWRDLRRARLLEAARRVFARLGYEAATVDDIAFEAGIGKPTIYRYFEGKEALFEAVFAQTLDDLEARLDAALAVPGPMAERLSRLVGEMVPTFRDHIVPMRDLSGGETWKRRVFRPRRARIAARLAGVIAEGQAAGEARAVDPAVAARFLIGLVWSGTNSDLAGDAEITAAIVDFAFRGLAPEGRP*