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berkeley_reactor_200306_biofilm_scaffold_87643_7

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 4647..6107

Top 3 Functional Annotations

Value Algorithm Source
Putative multidrug efflux protein n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8J7E6_HYPSM similarity UNIREF
DB: UNIREF100
  • Identity: 61.7
  • Coverage: 470.0
  • Bit_score: 582
  • Evalue 3.80e-163
multidrug efflux protein similarity KEGG
DB: KEGG
  • Identity: 61.7
  • Coverage: 470.0
  • Bit_score: 582
  • Evalue 1.10e-163
Putative multidrug efflux protein {ECO:0000313|EMBL:CCB67259.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.7
  • Coverage: 470.0
  • Bit_score: 582
  • Evalue 5.30e-163

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Taxonomy

Hyphomicrobium sp. MC1 → Hyphomicrobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1461
GTGACCCGGAGCACCACCTTCCTGCCCTCGGGCCGCCTGCTGCCGGTGATCATCGCCACCGGGCTGTTCATGGAGAACCTCGACGCGACGGTGCTCTCCACCGCGCTGCCGACCATCGCCCGCGACTTCGGCACCAGCCCGATCCATCTCAAGCTCGCCCTGACCAGCTATCTCCTGGCGCTCGCCATCTTCATCCCCGCCTCCGGCTGGATGGCCGACCGCTTCGGCGCCCGCACCGTGTTCCGCGGCGCCATCGTCGTGTTCGGCGCCGGCTCGATCGCCTGCGGCCTGTCGAACGGCCTCACCGAGCTCGTCGCCGCCCGCGTGCTGCAGGGTGTCGGCGGCGCGATGATGGTGCCGGTCGGCCGGCTGATCATCCTCAAGACCACGCCCAAGCACGACCTGGTCAACGCCATGGCCTGGCTGACCATCCCCGCCCTGCTCGGCCCCGTTACCGGCCCGCCGCTCGGCGGCTTCATCACCACCTATTTCTCCTGGCGCTGGATCTTCTGGATCAACATCCCGATCGCGGTGCTCGGCATCGTGCTGGCGAGCCTGTTCGTGCCCAACGTGCGCGAGGACGAGCGCCGGCCGTTCGACCTCCTCGGCTTCGTCCTGGTCGGCCCCGGCCTCGCCGCGCTGCTCACCGGGGCGACGCTGGCCGGGCTCGGCCTGGTCGAGCCTTCGACCACCCTCGCCCTGGTCGCCGGCGGCGTCGTGCTGCTCGCCCTGTTCGTGCGCCACGCCCTCGTCAGCCCGGCGCCGATCATCGAGCTCAAGCTGCTGCGCTTCCCGACCTTCCGGGCCTCCGTCGTCGGCGGCTTCCTGTTCCGTGTCGGCGTCGGCGCCACGCCTTTCCTGCTGCCGCTGCTGTTCCAGCTCGGCTTCAACTTCACGCCGTTCGAATCCGGGCTGCTGACGCTCTCGACCGGCCTCGGCGCCATGGCGATGAAGACCCTCGCGTCCACCGTGCTGCGCCGCTACGGCTTCCGCACCGTGCTGGTCGCCAATGCGGTGCTGTCCTCGGCCTTCGTCGCGGCGCCGGCCCTGTTCCATGCCGGCATGCCGGTGGCGCTGATCGCCGCCACGCTGCTCGCCGGCGGCTTCGTGCGCTCGCTGCAGTTCACCAGCGTCAACGTCTCGGCGGTCGCCGAGGTGCCGGATCATCTGATGGGCCGGGTGACCAGCTTCACCGCGGTGCTGCAGGAGCTGTCGGGCTCGGTCGGCGTCTCCGTCGCGGCCCTCGGCCTGCAGGCCTCGCAGAGCGCCTTCGGCAGCACGGCGCTGACCGCGCCGATGTTCCCGCCGGTGTTCCTGCTGGTCGGCGGCATCGCCGCCCTCTCCACCCTGCTGTTCCTGCAGCTGCCGCGGGATGCCGGCAGCAACATGCTCGCGCCGGCCGAGCGCCCGGTCGCGGCCCGGGCAGCGGCCACGGCGCCGGAACCCTTGCAAAGACTGTGA
PROTEIN sequence
Length: 487
VTRSTTFLPSGRLLPVIIATGLFMENLDATVLSTALPTIARDFGTSPIHLKLALTSYLLALAIFIPASGWMADRFGARTVFRGAIVVFGAGSIACGLSNGLTELVAARVLQGVGGAMMVPVGRLIILKTTPKHDLVNAMAWLTIPALLGPVTGPPLGGFITTYFSWRWIFWINIPIAVLGIVLASLFVPNVREDERRPFDLLGFVLVGPGLAALLTGATLAGLGLVEPSTTLALVAGGVVLLALFVRHALVSPAPIIELKLLRFPTFRASVVGGFLFRVGVGATPFLLPLLFQLGFNFTPFESGLLTLSTGLGAMAMKTLASTVLRRYGFRTVLVANAVLSSAFVAAPALFHAGMPVALIAATLLAGGFVRSLQFTSVNVSAVAEVPDHLMGRVTSFTAVLQELSGSVGVSVAALGLQASQSAFGSTALTAPMFPPVFLLVGGIAALSTLLFLQLPRDAGSNMLAPAERPVAARAAATAPEPLQRL*