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berkeley_reactor_200306_biofilm_scaffold_87643_8

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 6160..7404

Top 3 Functional Annotations

Value Algorithm Source
Multidrug efflux system, subunit A (AcrB family) n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z5X6_AZOL4 similarity UNIREF
DB: UNIREF100
  • Identity: 39.3
  • Coverage: 415.0
  • Bit_score: 279
  • Evalue 4.50e-72
Multidrug resistance protein MdtA {ECO:0000313|EMBL:CEJ14666.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.3
  • Coverage: 392.0
  • Bit_score: 377
  • Evalue 1.70e-101
mdtA2; multidrug efflux system, subunit A (AcrB family) similarity KEGG
DB: KEGG
  • Identity: 39.3
  • Coverage: 415.0
  • Bit_score: 279
  • Evalue 1.30e-72

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Taxonomy

bacterium YEK0313 → Bacteria

Sequences

DNA sequence
Length: 1245
ATGATGAAACGCTTGGCAAACTGGCTCTTCGTTCTCGCGGTCATCGCCGGCCTCGGCTGGTGGCAGCGGACGACCGTGGTTCCCTTCCTCGTGCAGCATGTGCCGGGCTCGGCCGCCGTGCTGGCCTCGGTGCCGGGCCTTGCCGAGGCCGCGGCGCCGCCGGCCGCCAACCCCAAGGCTGCCGAGGCCGGCCGCCAGCACCGCGGCGGCGCCGTGCCGGTCGTGCTCGCCAAGGCCGAGAGCAAGGCCGTGCCGGTGACGATCGACGCCGTCGGCACCGTCCAGTCCATCGCCTCCATCGCCATCCGTCCGCGCCTCGACAGCCAGATCGCCACCGTGGACATCGCCGAGGGTGCGCGCGTGCAGAAGGGCGACCGCCTGTTCACGCTCGACGACCGCGCCGTCAAGGCGCAGCTCGCCCAGATCGATGCCCAGATCGAGAAGGACCAGGCGCAGATCCAGCAGGCCCAGAACGACCTGCGCCGCGCCCAGGACCTGCTCAAGACCAGCGCCGGCAGCGTCGTCACCCGCGACACCGCGGTGACCACGCTGAAGACAGCGCAGGCCCAGCTCGCGGTCGACCAGGCCTCGCACGACGCCATGGACACGCAGCTCTCCTACACCGTCATCACCGCGCCGGTGACCGGGCGGGTCGGCTCGATCCCGATGAAGCCCGGCGCCATCGTCCGCGCCGCCGATGCGGCCCCCCTCGCCACGCTCAACCAGATGGACCCGGTCCAGGTCGCCTTTTCCATCCCGCAGACGCGCCTGGCGGAGCTGCGCGAGGCGATCGCCGCCGGCAACGTCCGCGTCGACGTCACCCAGGGCAAGACCACCGTCTCCGGCACGGTCGACTTCATCGAGAACGCCGTCGACACCACCACCGGAACGGTCGGCGTCAAGGCCAAGGTGCCCAATGCCGACGAGGTGCTGTGGCCGGGGGCCTATGTGCAGGCGCAAGTGGTGATCGCTCCGAAGGGCGAGTCGATCACCATCCCCACGGCCGCCCTCCAGCTCGGCCAGCAGGGTCCCTACGTCTTCGCCATCAAGGACGGCAAGACCGCGCAGCTCAGGCAGGTCAGCATCACCCGCAGCTCCGGCCCGGACACGATCGTCACATCCGGCCTGTCGCTGGGCGAGGACGTCGTGGTCGACGGCCAGCTCCGGCTGGTCGACGGCGCCGAGGTCAGCATCAAGCCGCCGGCGAACGACACCGCCGCCAACATTCCCGTTCCGAAGGGCTGA
PROTEIN sequence
Length: 415
MMKRLANWLFVLAVIAGLGWWQRTTVVPFLVQHVPGSAAVLASVPGLAEAAAPPAANPKAAEAGRQHRGGAVPVVLAKAESKAVPVTIDAVGTVQSIASIAIRPRLDSQIATVDIAEGARVQKGDRLFTLDDRAVKAQLAQIDAQIEKDQAQIQQAQNDLRRAQDLLKTSAGSVVTRDTAVTTLKTAQAQLAVDQASHDAMDTQLSYTVITAPVTGRVGSIPMKPGAIVRAADAAPLATLNQMDPVQVAFSIPQTRLAELREAIAAGNVRVDVTQGKTTVSGTVDFIENAVDTTTGTVGVKAKVPNADEVLWPGAYVQAQVVIAPKGESITIPTAALQLGQQGPYVFAIKDGKTAQLRQVSITRSSGPDTIVTSGLSLGEDVVVDGQLRLVDGAEVSIKPPANDTAANIPVPKG*