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berkeley_reactor_200306_biofilm_scaffold_87643_22

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 21667..22440

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter, permease protein n=1 Tax=Variovorax paradoxus B4 RepID=T1X9B0_VARPD similarity UNIREF
DB: UNIREF100
  • Identity: 58.7
  • Coverage: 252.0
  • Bit_score: 307
  • Evalue 9.50e-81
ABC transporter, permease protein similarity KEGG
DB: KEGG
  • Identity: 58.7
  • Coverage: 252.0
  • Bit_score: 307
  • Evalue 2.70e-81
ABC transporter, permease protein {ECO:0000313|EMBL:AGU49522.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.7
  • Coverage: 252.0
  • Bit_score: 307
  • Evalue 1.30e-80

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 774
ATGATGCCCCGACCGATGTCCGGCATGACCTGGCGCGCCATCGCCGGCTCGCCCTGGGCCGCCATCGCCGCCGTCACCCTGGCCTGGTGGGCGCTGGTGCCGCTGCTCAGGATCGAGCCGCGCTACCTGCCCCCGCTCGCCGCCGTGGTCCGGGACGGCATGTCGGTCTGGCCGGACCTTCTCGCCGGCTTCTGGCGCACGCTGGTCGAGACGCTGCTGGGCTTTGCGGCCGGCGCCTTGCTCGGCATCGCCTGCGGCATCGGCTTCGCCCATGTCAGGCTGATGGAGCGGGCGGTCTTCCCGCTGTTCGTGGCGCTGCAGACCGTGCCGATCATCGCCTTCGGCGCCATCGTCGTCATCTGGTTCGGCAACACCATCCTGGCCAAAGTGGTGATCGCGCTCTACCTCACCTTCTTCCCCGTCACGGTCAACACGCTGCGCGGCCTGCAGGCGGTCGAGCCGCAGCGCGTCGCGCTGATGCGCAGCTTCGGGGCCGGAGGGCTGCAGCTCTTCCTCAAGCTCGCCCTGCCCTCGGCGCTGCCGACCATCATGGTCGGCCTGAAGCTCGGCATCTCGCTGAGCCTGGCCGGCGCCATCGTCGGCGAATGGTTCGGCGACACGGTCGGCCTCGGCGTCATGCTGCTGCAGGCACTCTATTTCGAGCAGATCCCGCGCATCTGGCTCTTGATCGTCGCCTCGGGCCTGATGGGCGCCGGGCTCTATGGCAGCCTCACCCTGATCGAGAGGAGGTTCGTCTGGTGGCGTCCCGATTGA
PROTEIN sequence
Length: 258
MMPRPMSGMTWRAIAGSPWAAIAAVTLAWWALVPLLRIEPRYLPPLAAVVRDGMSVWPDLLAGFWRTLVETLLGFAAGALLGIACGIGFAHVRLMERAVFPLFVALQTVPIIAFGAIVVIWFGNTILAKVVIALYLTFFPVTVNTLRGLQAVEPQRVALMRSFGAGGLQLFLKLALPSALPTIMVGLKLGISLSLAGAIVGEWFGDTVGLGVMLLQALYFEQIPRIWLLIVASGLMGAGLYGSLTLIERRFVWWRPD*