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berkeley_reactor_200306_biofilm_scaffold_87643_23

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 22425..23171

Top 3 Functional Annotations

Value Algorithm Source
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component n=1 Tax=Herbaspirillum sp. YR522 RepID=J3CMA7_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 56.5
  • Coverage: 246.0
  • Bit_score: 274
  • Evalue 6.60e-71
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component {ECO:0000313|EMBL:EJN08699.1}; Flags: Precursor;; TaxID=1144342 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. YR522.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.5
  • Coverage: 246.0
  • Bit_score: 274
  • Evalue 9.30e-71
ABC transporter, permease protein similarity KEGG
DB: KEGG
  • Identity: 54.5
  • Coverage: 242.0
  • Bit_score: 268
  • Evalue 1.80e-69

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Taxonomy

Herbaspirillum sp. YR522 → Herbaspirillum → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 747
GTGGCGTCCCGATTGATGCCCTTCGCGCCCGTCGCCATCGCGTTGGCGGTCCTGCTCGGCCTCTGGCAGGCCGGCGCGGCGCTGTTCGACATCCCGACCTATATCCTGCCGCGCCCGGTCGACATCCTCGTCAACGTCGTCGCCAGCCGCGACCTGCTCGCCGCCGCCATGGCCATCACCCTCACCGAGGCCGTGCTCGGCTTCCTCGCCGGCGCGGCGATCGGCCTCGCCCTCGCCGTCCTCATGGCCCTGGTGCCGCCGCTCGAACTCAGCCTGATGCCGCTGGTGGTGGCGGTCAGTTCGGTGCCCTCCGTCGCCTTCGTGCCGCTGATGCTGATCTGGTTCGGCCTCGGCATGGGCTCGAAGATCGCCATGGCCGCGCTCGCCGTCAGCTTTGCCGTGCTGCTCAATGCGCTGGACGGCCTGAGACGCCCGGAGCAGGGCGCGATCGACCTGATGCGCAGCTTCGGGGCCGGCCGGCTCGGCATCCTCTGGCGCCTGCAGCTGCCGGCGGCGATGCCGTCCATCGTCACCGGGCTGCGGGTGGGCCTTGCCCGCAGCACCATCGCCGTCATCGTGGCGGAGATGCTGGGCGCCTATGCCGGCATCGGCCAGATCATCTATCAGTCGACGGCGCAGGTGGACTACCTTGCCGTGTGGGCCGCCGTGCTCACCGCCTCGCTCGGCAGCCTCGCCCTCTACGCCGTCCTGGTCGCGATCGACCGCAAGCTCATTTGGTGGAGATGA
PROTEIN sequence
Length: 249
VASRLMPFAPVAIALAVLLGLWQAGAALFDIPTYILPRPVDILVNVVASRDLLAAAMAITLTEAVLGFLAGAAIGLALAVLMALVPPLELSLMPLVVAVSSVPSVAFVPLMLIWFGLGMGSKIAMAALAVSFAVLLNALDGLRRPEQGAIDLMRSFGAGRLGILWRLQLPAAMPSIVTGLRVGLARSTIAVIVAEMLGAYAGIGQIIYQSTAQVDYLAVWAAVLTASLGSLALYAVLVAIDRKLIWWR*