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berkeley_reactor_200306_biofilm_scaffold_87643_26

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(24760..25236)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator n=1 Tax=Rhizobium sp. AP16 RepID=J2CVD1_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 81.4
  • Coverage: 156.0
  • Bit_score: 257
  • Evalue 5.30e-66
Transcriptional regulator {ECO:0000313|EMBL:EJK81084.1}; Flags: Precursor;; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. AP16.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.4
  • Coverage: 156.0
  • Bit_score: 257
  • Evalue 7.50e-66
MarR family transcriptional regulatory protein similarity KEGG
DB: KEGG
  • Identity: 72.8
  • Coverage: 158.0
  • Bit_score: 241
  • Evalue 1.50e-61

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Taxonomy

Rhizobium sp. AP16 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 477
ATGAGCGAAGCCGAGCGAACGCTGGCCGGAACCGCCTTGACCGATCTCGTCCTCGACCTGTTCAGGCTCCACAGCCGCATGCTCGCCTCCGGCGACAGGCTGGTGGCTCCCCTCGGCCTGACGAGCGCCCGCTGGCAGATCCTCGGTGCGATCATCACGGCGGGCCGGCCGCAGCCGGTCGCCTGGCTGGCGCGCGACATGGGAGCCAACCGCCAGAACGTCCAGCGCATCGTCAACGATCTGGAAGAGGAGGGGCTCGTCGCTTTCGAGCCCAATCCGCATCACCGCCGGGCGCAGCTCGTCGTGCTGACGGACAGGGGCAGGCAGACCTTCGAGGCTGCCATGCGCCTGCAGGCGCCGTGGGCCAACGAGCTCGCGGACGGACTTGCGCTGGAGGACATCGAGACGATGCGCAGGGTCATGTCGGCGTTGCGCAGCAAGCTGGACGGACACGCGGATGCCGAGGAGCCGGCCTGA
PROTEIN sequence
Length: 159
MSEAERTLAGTALTDLVLDLFRLHSRMLASGDRLVAPLGLTSARWQILGAIITAGRPQPVAWLARDMGANRQNVQRIVNDLEEEGLVAFEPNPHHRRAQLVVLTDRGRQTFEAAMRLQAPWANELADGLALEDIETMRRVMSALRSKLDGHADAEEPA*