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berkeley_reactor_200306_biofilm_scaffold_95231_43

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(42187..43389)

Top 3 Functional Annotations

Value Algorithm Source
NADH-quinone oxidoreductase, E subunit {ECO:0000313|EMBL:ACB79191.1}; EC=1.6.99.5 {ECO:0000313|EMBL:ACB79191.1};; TaxID=441620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.9
  • Coverage: 412.0
  • Bit_score: 399
  • Evalue 4.00e-108
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002E39930 similarity UNIREF
DB: UNIREF100
  • Identity: 61.4
  • Coverage: 402.0
  • Bit_score: 486
  • Evalue 1.40e-134
NADH-quinone oxidoreductase subunit E similarity KEGG
DB: KEGG
  • Identity: 52.9
  • Coverage: 412.0
  • Bit_score: 399
  • Evalue 8.10e-109

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Taxonomy

Methylobacterium populi → Methylobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1203
ATGTCCGTCCGCCGTCTCGCGCCCAAGGAACTCCAGCCCGACGCCTTCGCCTTCACGGCGGAGAACGAGGCGTGGGTCGACAAGGAGATCGCCAAGTACCCGCCGGGCCGCCAGGCTTCGGCGGTGATCCCGCTCCTGTGGCGCGCCCCGGAGCAGGCCGGCGGCTGGGTGCCGCAGGCGGCGATCGAGGCGGTGGCGGCGCGGCTCGGCATGGCCAGGATCCGGGTGCTGGAGGTCGCGACCTTCTACACCATGTTCAACCTCGAGCCGGTCGGGCGCTACTTCATCCAGATGTGCGGCACCACGCCCTGCCAGCTGCGCGGCGCCGGCGCCATCCGCAAGGTGCTGGAGGAGCGCATCGGCGACCAGCATCACGTCACGCCGGACGGCAAGTTCTCCTGGCTCGAGGTCGAGTGCCTCGGCGCCTGCTGCAACGCGCCGATGGTGCAGATCAACTACGACTATTACGAGGACCTGACGCCCGAGAGCATGGGCAAGCTCATGGACGACCTCGCCGCCGGCCGGCCGGTCAAGACCGGCTCGCAGATCGGCCGCGTCACCTCCGAGCCGGAGGGCGGGGCGCAGACGCTGACCGACCCGACGCTCTATGACGGCTCGGTCGTCGGCTCCTGGCGCAAGCGCTTCGAGGAAGAGGCGGCCAAGAAGGCGGCCGCTGCCGCGGCGCCGCCTGCGCCCGCCGCGCCTGCTCCCGCTCCGGTCGCGCCAGCTCCCGCCGCGCCGGCTCCGGTTGCGGCCGCGCCGAAGCCCGACGCGACGCCGGCCAAGGCCGCGGCGGCCGAGGCCGACAGCGCCAAGGTGCCGGCGAGCCCGAAGCCCGACCCCGCCATCGACCGCGCCGGTCCGGTCAACCCGCCGGTCGCCGCCGCGGGCGGCCCGGCCGAGACGGTCTCGGACGAGCACAAGCCGGTGCTGCTCGCCGCCGCGCGCGAGGGCGGCGGCGACGACCTCAAGCTGATCTGGGGCGTCGGGCCGAAGCTGGAGGAGATGCTGCACCAGATGGGCGTGTTCCATTTCGACCAGATCGCCGCCTGGACCGACATGAACCTGCGCTGGGTCGACCAGAACCTCGGCGCCTTCAAGGGGCGGGCGGTCCGCGACGACTGGATCGGCCAGTCGAAGAAGCTGGCCACCGGCTGGCGGCCCGAGAACGCCGCGGGCGCCAACCCGCATCCCCATTCCTGA
PROTEIN sequence
Length: 401
MSVRRLAPKELQPDAFAFTAENEAWVDKEIAKYPPGRQASAVIPLLWRAPEQAGGWVPQAAIEAVAARLGMARIRVLEVATFYTMFNLEPVGRYFIQMCGTTPCQLRGAGAIRKVLEERIGDQHHVTPDGKFSWLEVECLGACCNAPMVQINYDYYEDLTPESMGKLMDDLAAGRPVKTGSQIGRVTSEPEGGAQTLTDPTLYDGSVVGSWRKRFEEEAAKKAAAAAAPPAPAAPAPAPVAPAPAAPAPVAAAPKPDATPAKAAAAEADSAKVPASPKPDPAIDRAGPVNPPVAAAGGPAETVSDEHKPVLLAAAREGGGDDLKLIWGVGPKLEEMLHQMGVFHFDQIAAWTDMNLRWVDQNLGAFKGRAVRDDWIGQSKKLATGWRPENAAGANPHPHS*