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berkeley_reactor_200306_biofilm_scaffold_95231_57

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(57667..60096)

Top 3 Functional Annotations

Value Algorithm Source
Lon protease {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174}; EC=3.4.21.53 {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174};; ATP-dependent protease La {ECO:0000256|HAMAP-Rule:MF_01973}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.9
  • Coverage: 812.0
  • Bit_score: 1303
  • Evalue 0.0
ATP-dependent protease La (EC:3.4.21.53) similarity KEGG
DB: KEGG
  • Identity: 80.9
  • Coverage: 812.0
  • Bit_score: 1303
  • Evalue 0.0
Lon protease n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A1F4_STAND similarity UNIREF
DB: UNIREF100
  • Identity: 80.9
  • Coverage: 812.0
  • Bit_score: 1303
  • Evalue 0.0

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Taxonomy

Starkeya novella → Starkeya → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2430
ATGACTTCGACCAGACCGCGCCCCTCCGTGCCGCCCGGCACCGTGGACACCTTTCCCGTGCTTCCGCTGCGCGACATCGTGGTCTTCCCGCATATGATCGTGCCGCTGTTCGTCGGCCGCGAGAAGTCGATCCGCGCCCTCGAAGAGGTGATGCGCACCGATCGCCACATCCTGCTGGCGACGCAGATGAACGCCTCCGAGGACGACCCCTCGACCGAGGCGATCTATCGCATCGGCACGCTGGCCTCCGTGCTGCAGCTCCTCAAGCTGCCCGACGGCACCGTCAAGGTGCTGGTGGAGGGCGTCGATCGCGCCCAGGTGCGCGCCTACAATTCCCGCGAGGAGTTCTACGAGGCCGAGGCCGAGGTGCTGGCCGACGTCGGCGCCGAGCGCGTCGAGGCCGAGGCGCTGGCCCGCTCGGTCGTGGCCGAGTTCGAGAGCTATGTGAAGCTCAACAAGAAGGTCTCGCCCGAGGTGGTCGCGGCGGTGAACCAGATCGAGGACTATTCCAAGCTCGCGGACACCATCACCTCGCATCTCGCCGTCAAGATCCCGGAGAAGCAGTCGGTCCTGGAGATCCTGGAAGTGCCGGCGCGCCTGGAAAAGGTGCTCGGCCTGATGGAGAGCGAGATCTCGGTCCTGCAGGTGGAGAAGCGCATCCGCTCGCGCGTCAAGCGCCAGATGGAGAAGACCCAGCGCGAGTACTACCTCAACGAGCAGATGAAGGCGATCCAGAAGGAGCTGGGCGACGAGGAAGGCAAGGACGAGCTCGGCGAGATCGAGCAGAAGATCAAGAGCGTCAAGCTGTCCAAGGAAGCCCGCGACAAGGCGCAGGCGGAGCTGAAGAAGCTGCGCCAGATGTCGCCGATGTCGGCCGAGGCGACGGTCGTGCGCAACTATCTCGACTGGATCCTGTCGCTGCCCTGGGGCGACAAGTCGCGCATCAAGAAGGACCTGCCGCATGCGCAGGAGATCCTGGATGCCGACCATTTCGGCCTCGACAAGGTCAAGGAGCGCATCATCGAGTATCTGGCGGTGCAGCAGCGCGCCAACCGCCTGACCGGCCCGATCCTGTGCCTCGTCGGCCCGCCCGGCGTCGGCAAGACCTCGCTCGCCAAGTCGATCGCCAAGGCCACCGGGCGTGAATATATCCGCATGTCGCTCGGCGGCGTGCGCGACGAGGCCGAGATCCGCGGCCACCGGCGCACCTATATCGGCTCGATGCCCGGCAAGGTCATCCAGTCGATGCGCAAGGCCAAGAAGCAGAATCCGCTCTTCCTGCTCGACGAGATCGACAAGATGGGCATGGATTTCCGCGGCGACCCGTCCTCGGCCCTGCTGGAGGTGCTGGACCCCGAGCAGAATGCGACGTTCAACGACCATTACCTGGAGATCGACTACGACCTCTCCAACGTGATGTTCGTGACCACGGCGAACACGCTCAACATCCCGCCGGCCCTCCTGGACCGCATGGAGATCATCCGCATCGCCGGCTACACCGAGGACGAGAAGGTCGAGATCGCCCGCCGGCATCTCATCCCCAACGCGGTGAAGAAGCATGGCCTGAAGGGCAAGGAGTTCACGATCGACGATGAGGCGCTGCTCTCGCTGGTGCGCCGCTACACGCGGGAAGCCGGCGTGCGCAACCTCGAGCGCGAGCTCTCCAACCTCGCCCGCAAGGCGGTGAAGGACATCCTCCTGACCAAGCGCAAGTCGGTGAAGGTGACGGAGACCCTGCTGGCCGACTATCTCGGCCCGCCGAAGTTCCGCCACGGCATCGCCGAGCTCGAGGATCAGGTCGGCGCCGTCACGGGCCTGGCCTGGACCGAGGTCGGCGGCGAGCTGCTCACCATCGAGGCGGTGCTGATGCCCGGCCGCGGCCGCATGACCGTGACCGGCAACCTCAAGGACGTGATGCGCGAATCGATCTCGGCGGCGGCCTCCTATGTCCGCTCGCGGGCGATCGACTTCGGCATCGAGCCGCCTCTGTTCGAGCGTCGCGACGTCCATGTCCACGTGCCGGAAGGCGCCACGCCCAAGGACGGCCCGTCCGCGGGCATCGCCATGGCCACGGCGATCGTCTCGGTGATGACCGGCATCCCGGTGCGCCGCGACATCGCCATGACCGGCGAGGTGACGCTGCGCGGCCGCGTGCTGCCGATCGGCGGCCTCAAGGAGAAGCTGCTGGCCGCGCTGCGCGCCGGCATCAAGACCGTGCTGATCCCCGAGGAGAACGCCAAGGACCTGGCCGAGATCCCCGACAACGTGAAGAACGGGCTGGAGCTCGTGCCCGTCTCGCGCATGGAGGAGGTGCTGGCCCAGGCCCTGACGCGCAAGCCCGAGGCCATCGTCTGGGAAGAGGAGCTGCCCGCCAAGGGCAAGCCTCCGGTTCTCGGCGAGGAGGAAGGGCCTGGCATGGTCGCGCACTGA
PROTEIN sequence
Length: 810
MTSTRPRPSVPPGTVDTFPVLPLRDIVVFPHMIVPLFVGREKSIRALEEVMRTDRHILLATQMNASEDDPSTEAIYRIGTLASVLQLLKLPDGTVKVLVEGVDRAQVRAYNSREEFYEAEAEVLADVGAERVEAEALARSVVAEFESYVKLNKKVSPEVVAAVNQIEDYSKLADTITSHLAVKIPEKQSVLEILEVPARLEKVLGLMESEISVLQVEKRIRSRVKRQMEKTQREYYLNEQMKAIQKELGDEEGKDELGEIEQKIKSVKLSKEARDKAQAELKKLRQMSPMSAEATVVRNYLDWILSLPWGDKSRIKKDLPHAQEILDADHFGLDKVKERIIEYLAVQQRANRLTGPILCLVGPPGVGKTSLAKSIAKATGREYIRMSLGGVRDEAEIRGHRRTYIGSMPGKVIQSMRKAKKQNPLFLLDEIDKMGMDFRGDPSSALLEVLDPEQNATFNDHYLEIDYDLSNVMFVTTANTLNIPPALLDRMEIIRIAGYTEDEKVEIARRHLIPNAVKKHGLKGKEFTIDDEALLSLVRRYTREAGVRNLERELSNLARKAVKDILLTKRKSVKVTETLLADYLGPPKFRHGIAELEDQVGAVTGLAWTEVGGELLTIEAVLMPGRGRMTVTGNLKDVMRESISAAASYVRSRAIDFGIEPPLFERRDVHVHVPEGATPKDGPSAGIAMATAIVSVMTGIPVRRDIAMTGEVTLRGRVLPIGGLKEKLLAALRAGIKTVLIPEENAKDLAEIPDNVKNGLELVPVSRMEEVLAQALTRKPEAIVWEEELPAKGKPPVLGEEEGPGMVAH*