ggKbase home page

berkeley_reactor_200306_biofilm_scaffold_95231_60

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(62155..62970)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037845B0 similarity UNIREF
DB: UNIREF100
  • Identity: 69.1
  • Coverage: 259.0
  • Bit_score: 336
  • Evalue 2.00e-89
short-chain dehydrogenase/reductase SDR similarity KEGG
DB: KEGG
  • Identity: 63.6
  • Coverage: 261.0
  • Bit_score: 298
  • Evalue 1.70e-78
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ABS66387.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.6
  • Coverage: 261.0
  • Bit_score: 298
  • Evalue 8.60e-78

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Xanthobacter autotrophicus → Xanthobacter → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 816
ATGACCGCCGCACCGGACGGACCTTCCTCGCTCGCGGCGACCTTCGGCCTTGCCGGCAAGGTCGCGGTCGTCACCGGCGGCGCCAGCGGCATCGGCCTCGCCACGGCGCAGGCCTTCGCTGCGGCCGGCGCCGAGGTGGTGATCGCCGACCGGGCCGAGGCGAGCGAGGAGGTGCTCGCCAGCGTGGCCGGGCCTCGGCGGGCCGACGCCGGGCCTCGGCGGGCCGACGCCGTGGTGGTCGACGTGGCCGACCCGGCGGCGGTGGACGCGGCGGTCGACACCGTGCTGGCGCGGCACGGCCGGCTCGACATCCTCGTCAACAATGCCGGCCTCGCCCTGCGCCGCGCCGCGGTCGAGCTGCCGCTGGAGGACTGGGACAAGGTCGTCGCCGTCAACATGACCGGCGCGTTCCTCTGCGCCCGGGCGGCAGCGAAGGCGATGATCGCCGGTGGCCGGGGCGGGGCCATCGTCAACACCGCCTCGATCATGGGCCTGTCGGGCGGCGGGCTCTATCCCAACATCTCCTACCAGACCACCAAGGGCGCGATCGTCAACATGACCCGGGCGCTGGCGGTGGAATGGGCGCCGCACGGCATCCGCGTCAATGCGGTGGCCCCCACCTACGTGCGCACGCCCTTCATCGCTCCGCTCCTGGCCCAGCCCGAGCTGGTGGCGCGCATCGAGGCGATGACGCCGCTGCGGCGCCTGGCCGAGCCGGAGGAGGTGGCTGCGGCCATGCTGTTCCTCGCCGGGCCGGGGGCCTCGATGATCACCGGCCACACCCTGCCGGTCGACGGCGGCTTCCTCGCGCAATAG
PROTEIN sequence
Length: 272
MTAAPDGPSSLAATFGLAGKVAVVTGGASGIGLATAQAFAAAGAEVVIADRAEASEEVLASVAGPRRADAGPRRADAVVVDVADPAAVDAAVDTVLARHGRLDILVNNAGLALRRAAVELPLEDWDKVVAVNMTGAFLCARAAAKAMIAGGRGGAIVNTASIMGLSGGGLYPNISYQTTKGAIVNMTRALAVEWAPHGIRVNAVAPTYVRTPFIAPLLAQPELVARIEAMTPLRRLAEPEEVAAAMLFLAGPGASMITGHTLPVDGGFLAQ*