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berkeley_reactor_200306_biofilm_scaffold_95231_69

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 72361..73992

Top 3 Functional Annotations

Value Algorithm Source
Histidine ammonia-lyase (EC:4.3.1.3) similarity KEGG
DB: KEGG
  • Identity: 54.9
  • Coverage: 541.0
  • Bit_score: 585
  • Evalue 8.30e-165
Histidine ammonia-lyase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YSZ8_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 68.9
  • Coverage: 543.0
  • Bit_score: 745
  • Evalue 2.20e-212
Histidine ammonia-lyase {ECO:0000313|EMBL:CEJ14539.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.5
  • Coverage: 543.0
  • Bit_score: 762
  • Evalue 3.20e-217

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Taxonomy

bacterium YEK0313 → Bacteria

Sequences

DNA sequence
Length: 1632
ATGGCGGTGACCATCGACGGCCGACGCATGACCGGGCAGAAGGTGGTGCGGGCGGCGCGCCCCGGCCCTGCCGGCCGCTGGGAGAAGGCGGTGCTCGCCCCGGCGGCGCGCGAGCGCATCGGCGAGGCGCGCGCCTATATCGAGCGCAACTGGCTCACCGACGACGCGCCGCTGATGTACGCCTTCAACACCGGCGTCGGCCTGTTCAAGGACGTGCGCATCCCGATCGCCGACATGGCGCGCTACCAGGACCAGACGATCCGCGCCCATGCCACGGGCATCGGCGAGCCGCTGCCGCGCGATGCGGTGCGCGCCACCATGCTGCTGCGCGCCAACGCCTTCGCCTCGGCCTATTCCGGCGCGACGCTCGGGCTGATCGACCGGCTGACCGGCTTCCTCAATGCCGGGCTGCATCCGGTGATCCCGGCCAAGGGCTCGGTCGGGGCTTCCGGCGACCTCGCCCCCCTCGCCTATCTCGCCGGCGCCATCCGCGGCTTCGAGGACGTCGCGGTCGAGTACAAGGGCCGGATCTACCCGGCCCCCGAGGCGGCACGCCGGGCGGGCCTGGCGCCGGACTATCCGATGGGCGCCAAGGAAGCCTCGGCCATCATCAACGGCTCGACGGTGTCGCTGGCCATCGCGACGCTGGCGGCCGAGGATGCCGGGCGCATCCGCAAGCATGCCGACGTGGCGCTCTGCCTGTCGCTCGAGGCGCTGCGCGGCGAGCTCGCCGCCTTCGACCAGCGCGTCCACGCCGCCCGCCCCCATCCCGGCCAGGCGCGGGTGGCGCGCAACGTGCTGCGCATCGCCGGCGAGTCCCGCCGCTGCTCGGAGGCGGCGCGGGCGGTGCTCTATCCCGACGAGACGCGCGATCCGGCGAAACCGATCCCGCTGCGGGTGCAGGACGTCTATTCCCTGCGCTGCGCGCCGCAGGTGCACGGGCCGGTCGCCGACGCGCTCGACTATATCGACGGCATCCTGACGACCGAGATGAACTCGGCCACCGACAACCCGCTGATGTTCGCGGACGGGGACGACCGCTTCGTCTCGATCTCCGGCGGGCATTTCCATGGCGCCTATGTCGCCCAGGCCATGGATCTGCTCGCCATCGCCATGGCTGACCTCGGCGCCATCTCCGAGCGGCGCCTCGCCCGCCTGATCGACCCGGCGATGAGCTACGGCCTGCCGCGCAACCTGGTGGCCGGCCAGCGCGGCCTCAACACCGGCTATGCCACGGTGCAGTGCTCGATGTCGGCCCTGGTGATGGAGAACCGTTCGCTGGCCACGCCCGGCTCGGTCGATTCGATCCCCGGCAAGGGCAATGCCGAGGACCACGTCTCCAACTCCACCTGGTGCGCCCGCAAGGCCCGCACCATCGTGGAGAATGTCGAGCAGATCGTCGCGGTCGAGATGCTGCTGGCGGCCCAGGCGCTGTCGCTGGTGGCCGAGCGCAGCAAGGACCATCCGATCGGACGGGGGTCACGCGCCGCCCTCGAGGCGATCCGGGCCAGAATCGAGCCGGCGCTCGCCGGCGACCGCTGGTATCATCACGAACTGGCTGCCATCCTCGACCTCGCCCGCTCCGGCACCATCGTGGCGGCAGTGGAGGAGGCGGTGGGAGCGCTGGAATAG
PROTEIN sequence
Length: 544
MAVTIDGRRMTGQKVVRAARPGPAGRWEKAVLAPAARERIGEARAYIERNWLTDDAPLMYAFNTGVGLFKDVRIPIADMARYQDQTIRAHATGIGEPLPRDAVRATMLLRANAFASAYSGATLGLIDRLTGFLNAGLHPVIPAKGSVGASGDLAPLAYLAGAIRGFEDVAVEYKGRIYPAPEAARRAGLAPDYPMGAKEASAIINGSTVSLAIATLAAEDAGRIRKHADVALCLSLEALRGELAAFDQRVHAARPHPGQARVARNVLRIAGESRRCSEAARAVLYPDETRDPAKPIPLRVQDVYSLRCAPQVHGPVADALDYIDGILTTEMNSATDNPLMFADGDDRFVSISGGHFHGAYVAQAMDLLAIAMADLGAISERRLARLIDPAMSYGLPRNLVAGQRGLNTGYATVQCSMSALVMENRSLATPGSVDSIPGKGNAEDHVSNSTWCARKARTIVENVEQIVAVEMLLAAQALSLVAERSKDHPIGRGSRAALEAIRARIEPALAGDRWYHHELAAILDLARSGTIVAAVEEAVGALE*