ggKbase home page

berkeley_reactor_200306_biofilm_scaffold_95231_86

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 88444..89163

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, GntR family n=1 Tax=Pantoea sp. (strain At-9b) RepID=E6WLW6_PANSA similarity UNIREF
DB: UNIREF100
  • Identity: 50.2
  • Coverage: 229.0
  • Bit_score: 212
  • Evalue 3.00e-52
transcriptional regulator, GntR family similarity KEGG
DB: KEGG
  • Identity: 50.2
  • Coverage: 229.0
  • Bit_score: 212
  • Evalue 8.40e-53
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ADU72401.1}; TaxID=592316 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. (strain At-9b).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.2
  • Coverage: 229.0
  • Bit_score: 212
  • Evalue 4.20e-52

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pantoea sp. At-9b → Pantoea → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 720
ATGCGTCCCATTCAGCGTCCTCGCTCGCTGGCCTCGACGGTGCTCGACCAGCTGCGCGCCTCCATCGTCCGCGGCGACTTCGAGCTCGGCGCCCCGCTCTCCGAGCGCCAGCTCTCGGAAAGCCTCGGCGTCTCCAAGACGCCGGTGCGCGAGGCCCTGGCCCAGCTCAAGATGGAAGGGCTGGTCAAGATCTTCCCGCAGCGCGGGGCCTTCGTCTTCTCGCTGTCGGCGCGCGAGGTGATCGACCTGTGCGAATTGCGTCTGACGCTGGAGACCGCGGCGCTGCGCCTCGCCTTCGCCCGCCAGCGCAAGCCCCTGACCGACGGCCTCGCCAAGGTGACCGCGCGCATGCGCAAGGCCAAGGCCGACAACGACCTGCGCACCTATCTCGCCGCCGACACGGCCTTTCACGAAGTCCTGTTCGAGAGCTGCGGCAACCCGCTCTTCGCCGAGGCCTATGGCATGCATTCCGGCAAGATCGCCGCCCTGCGCAACCATCTGGCGGCCAAGCCGCGCCATACCGACCTTTCCTTTACCGAGCATGTCGAGATGGTCGATCTTCTCGTCCGCGGCGAGATCGAGCAGGCCCTCGCCGTGCTGGAGACCCATATCGGCCGGACCCGGGCGACCTATGCCGCCTGGATCGAGGACATCGCCGCCGCCGACCGCCGCCAGGAGACGGCGGCGAGGCTGCGGCAGGGCGACGCGTCGGAGGACTGA
PROTEIN sequence
Length: 240
MRPIQRPRSLASTVLDQLRASIVRGDFELGAPLSERQLSESLGVSKTPVREALAQLKMEGLVKIFPQRGAFVFSLSAREVIDLCELRLTLETAALRLAFARQRKPLTDGLAKVTARMRKAKADNDLRTYLAADTAFHEVLFESCGNPLFAEAYGMHSGKIAALRNHLAAKPRHTDLSFTEHVEMVDLLVRGEIEQALAVLETHIGRTRATYAAWIEDIAAADRRQETAARLRQGDASED*