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berkeley_reactor_200306_biofilm_scaffold_95231_98

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(105168..106259)

Top 3 Functional Annotations

Value Algorithm Source
3-isopropylmalate dehydrogenase (EC:1.1.1.85) similarity KEGG
DB: KEGG
  • Identity: 78.1
  • Coverage: 360.0
  • Bit_score: 553
  • Evalue 2.30e-155
Isocitrate/isopropylmalate dehydrogenase n=1 Tax=Rhizobium sp. CF080 RepID=J2KRR2_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 76.9
  • Coverage: 351.0
  • Bit_score: 556
  • Evalue 1.70e-155
3-isopropylmalate dehydrogenase {ECO:0000313|EMBL:KGM35682.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.0
  • Coverage: 363.0
  • Bit_score: 612
  • Evalue 2.70e-172

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Taxonomy

Inquilinus limosus → Inquilinus → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1092
ATGGCTCCTCTCACCATCGGCGTCCTCGAGGGGGACGATATCGGCCACGAGATCGTGCCGGCGGCCGTGCGCGTCGCCCGCGCCGCCTCGGCCCGCGCCGGCCTTGCCATCGACTGGAGGCCGATGCCGATCGGGCGCCGCGCTCTCGACAGCCACGGCTCGACCTTGCCGGAAGGCACCCTCGAAGCGCTGTCCGGCATGGACGGCTTCATCCTCGGGCCGATCGGCCATCAGGCCTATCCCAAGGGGCCGGGTGCGATCAATCCGCACCCGATCATGCGCAAGCATTTCGGCCTCTTCGCCAATGTGCGCCCGACCCGCGCCTTCCCCGGCCTCGGCGCCCTGCGCGACGACATCGACCTCGTCATCGTGCGCGAGAACAACGAGGGCTTCCAGCCGGACCGCAACGTCGTCGCCGGCTGCGGCGAGTTCCGCCCGACCGAGGACGTCACCATCTCGGTCCGCGTCATTACCCGCGCCGGCAGCTACCGCGTCGCCAGGGCGGCGCTCGCCATCGCCCGCTCGCGGCGCAAGAAGCTGACGCTGGTCCACAAGAACACCGTGTTCAAGCTCGGCTGCGGCATGTTCGTGGAGGAGTGCTACCGCGCCGCGCGCGAGTTTCCCGACGTCGCGGTCGACGAGGTCATCGTCGATACCTTCGCCATGCGCCTGGTGCGCGAGCCGCAGATTTTCGACGTGGTGGTGACCACCAACATGTTCGGCGACATCCTGTCCGACGAGGCGGCCGGCCTGGTCGGCGGCCTCGGCATGGCGCCGGGCCTGTGCATCGGCGAGGGCGACATCGCCATGGCGCAGGCGACGCACGGCTCGGCCCCCGACATTGCCGGCAAGGGCATCGCCAATCCCTATGCGATGATCGAATCCACCCGGATGATGCTGGAATGGCTCGGGCTCAACCGGGGCGTCGGCGAAGCCGTGACGGCCGCGGCGCTGATGCAGCGCGCCATCGCGACGGCGCTGGCTTCGCCGCAGACCCGCACCGGCGACATCGGCGGCGCCACCGGCACGCAAGGCATGACGGATGCCATCGTCGGAGCGATCGAGCGGGAGGCGGCGGCAGATCTCGCATAG
PROTEIN sequence
Length: 364
MAPLTIGVLEGDDIGHEIVPAAVRVARAASARAGLAIDWRPMPIGRRALDSHGSTLPEGTLEALSGMDGFILGPIGHQAYPKGPGAINPHPIMRKHFGLFANVRPTRAFPGLGALRDDIDLVIVRENNEGFQPDRNVVAGCGEFRPTEDVTISVRVITRAGSYRVARAALAIARSRRKKLTLVHKNTVFKLGCGMFVEECYRAAREFPDVAVDEVIVDTFAMRLVREPQIFDVVVTTNMFGDILSDEAAGLVGGLGMAPGLCIGEGDIAMAQATHGSAPDIAGKGIANPYAMIESTRMMLEWLGLNRGVGEAVTAAALMQRAIATALASPQTRTGDIGGATGTQGMTDAIVGAIEREAAADLA*