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berkeley_reactor_200306_biofilm_scaffold_95231_100

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(107883..108590)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator n=1 Tax=Rhizobium sp. CF080 RepID=J3CP88_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 65.0
  • Coverage: 226.0
  • Bit_score: 294
  • Evalue 5.90e-77
Transcriptional regulator {ECO:0000313|EMBL:CDX30449.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.2
  • Coverage: 229.0
  • Bit_score: 365
  • Evalue 2.90e-98
bacterial regulatory s, gntR family protein similarity KEGG
DB: KEGG
  • Identity: 43.3
  • Coverage: 215.0
  • Bit_score: 181
  • Evalue 2.70e-43

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Taxonomy

Mesorhizobium sp. ORS3359 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 708
ATGAGCGACAGCCCCGCCGACGCGCCGAGCTTCTCCCCGATCGATTTCCTGCGCACGCGCTCGCTCGCCAACGTGGTGCAGGCCGAGATCGAGCGGATGATCGTCGAGGGTGAGTTCACGCCGAACGAGCGCATCAACGAGAACGCCCTCGCCCAGCGCCTCGGCGTCAGCCGCGGGCCGATCCGCGAGGCCTGCAGCGCGCTCGCCGCCCTCGGCCTGATCCAGATCATCCCCAACCGCGGCTTCTTCGTCCGCGAGCTCAGCGAGAGCGAGGCCCGCGAGGTCTCCGAAGCGCGGGCAGGTGTCTTCGCCTGCATGGCCATGCTGCTCGCCGAGCGCATCACCGAGCCCGAGGTCGCCAAGCTCAGGGCCCTGGTCGACCGCATGGACGAGCTCGCCAGGCTGGGCGAGGTCAGCCAGTACTATCCGGTCAACCTCGAGTTCCATTCGGAGGTGGCGCGGATGTGCGGCAATGCCCGCCTGGCGCAGATCTATCTCAGCCTCGCCCGTGAGCTGCACATCCAGCGCTACCGCGCCCTGTCGAGCGGCGACGTGCTCGACGTCTCGAATGCCGAGCATCGCGCCCTTCTCGACGCCGTCGCGGCGCATGATGCCGCGCGCGCCTTCGCCGCCGGCCGCGCCCATATCGTCAACGGCATGCAGCGCACGCACCGGGCCGCGCTGGCGCGAAGCCCGGCGAAGCGTTAG
PROTEIN sequence
Length: 236
MSDSPADAPSFSPIDFLRTRSLANVVQAEIERMIVEGEFTPNERINENALAQRLGVSRGPIREACSALAALGLIQIIPNRGFFVRELSESEAREVSEARAGVFACMAMLLAERITEPEVAKLRALVDRMDELARLGEVSQYYPVNLEFHSEVARMCGNARLAQIYLSLARELHIQRYRALSSGDVLDVSNAEHRALLDAVAAHDAARAFAAGRAHIVNGMQRTHRAALARSPAKR*