ggKbase home page

berkeley_reactor_200306_biofilm_scaffold_95231_102

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(110567..111613)

Top 3 Functional Annotations

Value Algorithm Source
Candidate ABC type Fe3+ transport system, periplasmic component n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y5I1_RAMTT similarity UNIREF
DB: UNIREF100
  • Identity: 64.2
  • Coverage: 344.0
  • Bit_score: 438
  • Evalue 6.30e-120
Candidate ABC type Fe3+ transport system, periplasmic component {ECO:0000313|EMBL:CDX30443.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.9
  • Coverage: 348.0
  • Bit_score: 589
  • Evalue 2.40e-165
iron ABC transporter substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 64.2
  • Coverage: 344.0
  • Bit_score: 438
  • Evalue 1.80e-120

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Mesorhizobium sp. ORS3359 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1047
ATGTCGAGGACCATGATCGCAGCGGCCGTCTTCGTCGGCGGCCTGGCATTGAGCCAGGCGGCGTCGGCGGGCGCCCCGGCCCCCTATCCCGTCACATCGGACCTCGTCGCCGCGGCCACCAAGGAGGGCCACGTCGTCTACTACACCTCGACCGACGTGCAGGTGGCCGAGAAGCTCGGGGCCGCCTTCAAGGCGAAATATCCCGGCATCAGCGTCCAGGTCGAGCGTGCCGGCTCCGAACGCGTCTTCCAGCGCATCGGCCAGGAATATTCCAGCGGCGTCTACAATGCCGACGTGATCGAGACCTCGGACGCCGCGCATTTCCTGGTGTTCAAGGACCAGGGCTGGCTCAGCCCCGCGGTCCCCGAGGACGTGGCCAAGTATTGGCCCGAGAAGGACCGCGACCCCGACGGGCAATATGCCGCGTTCCGCTGCACCCTGACCGTCCTCGCCTACCGCTCCGACCTGGTGAAGGCGGAAGACGCGCCCAGGACCTGGACCGACCTTCTCGACCCCAAATACAAGGGCAAGCTCGTCAAGTCGCATCCCGGCTACAGCGGCAACGTCATGACCGCGACCTATGCGATGAGCCAGCTCCTGGGCTGGGACTATTTCGAGAAGCTCGGCCACCAGGGCATCATGCAGGTCCAGTCCTCGACCGAGCCGCCCAAGATCCTGTCGCAGGGCGAGCGGCCGATCCAGGCGGACGGCAACGAATACAACGTCTTCATCCTTCAGGATAAGGGCGTGCCGATCAAGGTGGTCTATCCCCCCGAGGGCACCTCGATCGCCTTCGGCAATGCGGCGATCCTCGGTCACGCGCCGCATCCCAACGCCGCCAGGCTGTTCTACGCCTTCATGTTCACCCAGGAGGCCCAGCAGCTGAACTACGACTTCGGCGGCCTGCGCTCGGTCCGGCCCGACATCAAGGAGAAGGCGACGCGCACGCCGCTGTCGCAGATCAAGCTGATCTATTCCGATCCCGCCGCCGTGCGCGATGCGGTCGACACCATCAAGCAGAAATACGAGCAGTATTTCGGAACATGA
PROTEIN sequence
Length: 349
MSRTMIAAAVFVGGLALSQAASAGAPAPYPVTSDLVAAATKEGHVVYYTSTDVQVAEKLGAAFKAKYPGISVQVERAGSERVFQRIGQEYSSGVYNADVIETSDAAHFLVFKDQGWLSPAVPEDVAKYWPEKDRDPDGQYAAFRCTLTVLAYRSDLVKAEDAPRTWTDLLDPKYKGKLVKSHPGYSGNVMTATYAMSQLLGWDYFEKLGHQGIMQVQSSTEPPKILSQGERPIQADGNEYNVFILQDKGVPIKVVYPPEGTSIAFGNAAILGHAPHPNAARLFYAFMFTQEAQQLNYDFGGLRSVRPDIKEKATRTPLSQIKLIYSDPAAVRDAVDTIKQKYEQYFGT*