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berkeley_reactor_200306_biofilm_scaffold_95231_119

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(126519..127874)

Top 3 Functional Annotations

Value Algorithm Source
sn-glycerol 3-phosphate ABC transporter n=1 Tax=Kaistia granuli RepID=UPI000363E7A0 similarity UNIREF
DB: UNIREF100
  • Identity: 72.5
  • Coverage: 447.0
  • Bit_score: 668
  • Evalue 3.70e-189
ugpBch2; sn-glycerol 3-phosphate ABC transporter similarity KEGG
DB: KEGG
  • Identity: 71.2
  • Coverage: 451.0
  • Bit_score: 661
  • Evalue 1.30e-187
sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB {ECO:0000313|EMBL:GAJ96939.1}; TaxID=1220581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rhizogenes NBRC 13257.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.2
  • Coverage: 451.0
  • Bit_score: 661
  • Evalue 6.40e-187

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Taxonomy

Agrobacterium rhizogenes → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1356
ATGAACCATTTGTTGCGCCAAGCAACGTTTGCCGCCGCGGGGCTCCTGACCCTGTCGCTCGGCGTGTCCACGGCTCTCGCCGAGAAGACGAAGATCGATTTCTGGTTCGGCAACAGCGGCGACATCGCCAATCGCGTGCAGGAAGTGTGCAAGCACTTCAACGACTCGCAGCCGGACTACGAAATCGTCTGCACCACGCAGGGCTCCTACGATGCCGCGGTGCAGAACACCATCGCCGCCTTCCGCGCCGGCAAGCAGCCGACCATCGTCCAGGTCTTCGATGTCGGCACCGCGACGCTGATGCTCTCCGACGCCTACTACCCCGCCTACAAGCTGATGGCCGACAACGGCTACACCGTCGACTGGAACAACTACTTCCCCGGCATCGCCCGCTACTACGCCACCTCCAAGGGCGAGATGCTGTCCTTCCCCTTCAACTCCTCCACGGCGCTGCTCTACTGGAACAAGGACGCCTTCGCCAAGATCGGCAAGGACCATGCGCCGGCGACCTGGGAAGAGGCCGGCGAGGACATGAAGGCGCTGAAGGCCGCCGGCTACAGCTGCCCCTTCGGCTTCAACATCAGCCGCGACGAGAGCTGGCAGCTGCTTGAGCAGTTCTCCGCCATCCATGGCGAGCCGATCGCCACCAAGAACAATGGCTATGACGGCCTCGACGCCCAGCTCCTGTTCAACAAGACCAAGTTCGTCCAATACGTGAAGGACCTCAAGAGCTGGTACGACCAGGGTCTTGCCGTGATCAAGTCGAAGGAGACCGGCCAGACCATGGTCGAGGCCTTCGCCGGCGGCGACTGCCAGATGATCCTCACCTCGGTCGGCGACCACGGCACCATCGGCCGCACCGCCAAGCAGGGCATGCAGTGGGACGTGTCCTGGCTGCCGGTCTACCAGGGCACCGAGCGCAAGAACTCCCTGGTCGGCGGCGCCTCGCTCTGGGTGCTCTCCGGCAAGTCCCAGGCCGAGTACAAGGGCGCGGCCGCCTTCCTCGCCTTCATCGCCAAGCCCGAGGAAGCGCTGTTCTGGTCCACGGTCACCGGCTACATCCCGGTCACCAAGTCGGGCTATGACTACATGGTCGAGCACGGCTTCTACGACAAGGCGCCCTACAAGGGCCGCGAATGGGCGATCAAGAGCCTGACCGCCACCGAGCCGACCCCGATCACCCGCGGCATCCGCCTCGGCTCCATGATCCAGATCCGCGGCGAGGTCGCCAACGGCCTGCAGGCGATCTTCGCCAAGAACACCGACGTCCAGGTGGCGATCGACGACGTCGTCGCCCGCGGCAACGATCTGATCAAGCGCTTCGCCGACACCTACGAAGGCAAGACGCTGCCCTGA
PROTEIN sequence
Length: 452
MNHLLRQATFAAAGLLTLSLGVSTALAEKTKIDFWFGNSGDIANRVQEVCKHFNDSQPDYEIVCTTQGSYDAAVQNTIAAFRAGKQPTIVQVFDVGTATLMLSDAYYPAYKLMADNGYTVDWNNYFPGIARYYATSKGEMLSFPFNSSTALLYWNKDAFAKIGKDHAPATWEEAGEDMKALKAAGYSCPFGFNISRDESWQLLEQFSAIHGEPIATKNNGYDGLDAQLLFNKTKFVQYVKDLKSWYDQGLAVIKSKETGQTMVEAFAGGDCQMILTSVGDHGTIGRTAKQGMQWDVSWLPVYQGTERKNSLVGGASLWVLSGKSQAEYKGAAAFLAFIAKPEEALFWSTVTGYIPVTKSGYDYMVEHGFYDKAPYKGREWAIKSLTATEPTPITRGIRLGSMIQIRGEVANGLQAIFAKNTDVQVAIDDVVARGNDLIKRFADTYEGKTLP*