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berkeley_reactor_200306_biofilm_scaffold_95231_122

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(130228..130800)

Top 3 Functional Annotations

Value Algorithm Source
Lipid A 3-O-deacylase (PagL) n=1 Tax=Microvirga sp. WSM3557 RepID=I4YPU2_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 45.5
  • Coverage: 200.0
  • Bit_score: 147
  • Evalue 7.20e-33
Lipid A 3-O-deacylase (PagL) {ECO:0000313|EMBL:EIM25984.1}; Flags: Precursor;; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.5
  • Coverage: 200.0
  • Bit_score: 147
  • Evalue 1.00e-32
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 42.2
  • Coverage: 204.0
  • Bit_score: 141
  • Evalue 1.90e-31

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Taxonomy

Microvirga lotononidis → Microvirga → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 573
ATGCGCCGTGCACTCTTCGTTTGCTGCCTCGTGGCGGCGCTGGGATCGGTGGGGGCTGCGAAAGCCGCCGACGTGGATACGACCGCGCCGCCCATGGTCAGCGATCCCTTCTTCAACGAAGTGCGCCTGGGCGTGATGGGCCACGGCATCGACACCAGCGACGAGATGGGTGATGTCGACCTCAACGTCGAGCTCCTGTTCTCCAAGCCGTTCCATGCCGATGGCTGGGTCGAATATCTGATCCCGCGTCCGCATGTCGGCGCCACCATCGATTTCGACGGCAGGACGAGCACCGCCTATGCCGGCGTGACCTGGCACGTGCAACCCTTCGAATTTCCGGTGTTCGTCGAGGCGAGCTTCGGCGGCAGCGTCAACAACGGCAAGGACGAGGGCAGCGAAAACCGTATCGCCGTCGGCTGCAACCTGCTGTTCCGCGAGTCCGCCGCGCTCGGCTACCAGTTCGACGAGCACTGGAGCGTCATCGCCTCGATCGAGCACAACTCCAATGCCGGGCTGTGCAGCGAGAATCGCGGCATCACCAATGCCGGCATGAAGATCGGCTACAAGTTCTAG
PROTEIN sequence
Length: 191
MRRALFVCCLVAALGSVGAAKAADVDTTAPPMVSDPFFNEVRLGVMGHGIDTSDEMGDVDLNVELLFSKPFHADGWVEYLIPRPHVGATIDFDGRTSTAYAGVTWHVQPFEFPVFVEASFGGSVNNGKDEGSENRIAVGCNLLFRESAALGYQFDEHWSVIASIEHNSNAGLCSENRGITNAGMKIGYKF*