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berkeley_reactor_200306_biofilm_scaffold_95231_132

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 141053..142021

Top 3 Functional Annotations

Value Algorithm Source
membrane protein n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI0003602F36 similarity UNIREF
DB: UNIREF100
  • Identity: 69.8
  • Coverage: 315.0
  • Bit_score: 455
  • Evalue 3.60e-125
putative transmembrane protein similarity KEGG
DB: KEGG
  • Identity: 69.7
  • Coverage: 317.0
  • Bit_score: 451
  • Evalue 1.10e-124
Putative transmembrane protein {ECO:0000313|EMBL:CCF00407.1}; TaxID=1117943 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium fredii (strain HH103) (Sinorhizobium fredii).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.7
  • Coverage: 317.0
  • Bit_score: 451
  • Evalue 5.50e-124

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Taxonomy

Sinorhizobium fredii → Sinorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 969
ATGGGAAGACCATTCTATCTCGGTGTGGCCGCCGCTGTCCTGGCAGCGTTCGCATGGTCGTCGAACTTCATCGCACCCTTCATGATCGGCAATTTCTCCCCTTTCGATCTTGCGCTGGTCCGGCACGTGGTTTCAGGGTTGGTCGGACTATGCATTCTATTATTGGAAAAGAACATATCGCAGCATCTCACGCGTCGTAACTGGCTCGTGGCGTCCTGGCTCGCCTTCATCGGCTATGTCGGCTACTTCCTGACGGTGACGGGAGCGGCGATCTATTGCGGGCCGGTTGTCGCTCCGGCTTTCGTGGGGCTTGTTCCGATCGTCCTCGCGCTCGTCGGCAACCTGCGGCAAGGGTCCGTACCGTGGCGCGCCCTCTCGGTACCTCTTGCTCTGGTCTCGATCGGCCTCCTTCTCGTCAACGGAGCGGCCTTCACAGCCGAGGGCTTGGATTCCGCGCGCTCGCTCCCGATCGGCATTCCGTTGGCGGCTGCCGCGGTGGTGCTCTGGGTCTGGTTCGCTATCGAGAACCAGGCGGCGATGGCTGCGAGACCGGACATGCCGTCGAGTGTCTGGACGGCTCTCATCCTCGTGGGCGGAGGCATCCAGATGCTGGCTATGGCCCCTTTCGGCACCGCCCTGGGCCTTTTCCAGCTTTCGAAGCTGGGCTTCGCATACGATGTCGCCGGCCGGCTCTATGTTTGGGGGGCGTCATTGGCGCTGTTGGCCACGGTCGGGGGCGTATGGGCATGGAACATGGCCGCACGCATCTTGCCGATCGCGCTGGCGGCTCAATTGATCGTCTTGGAAACGGTCTTCGGCATCATCGGCGGTCTCGTCATTCATGCTCGATGGCCGACCGCCGTCGAGAGCGGCGGCATCGTGATCCTGATTGCCGGAGTCCTTCTCACCATCCGCGTTTTTCATGAAGGGCGATCGAGGTCGAGCAGGTGCCATGTGCAGGACGCCTGA
PROTEIN sequence
Length: 323
MGRPFYLGVAAAVLAAFAWSSNFIAPFMIGNFSPFDLALVRHVVSGLVGLCILLLEKNISQHLTRRNWLVASWLAFIGYVGYFLTVTGAAIYCGPVVAPAFVGLVPIVLALVGNLRQGSVPWRALSVPLALVSIGLLLVNGAAFTAEGLDSARSLPIGIPLAAAAVVLWVWFAIENQAAMAARPDMPSSVWTALILVGGGIQMLAMAPFGTALGLFQLSKLGFAYDVAGRLYVWGASLALLATVGGVWAWNMAARILPIALAAQLIVLETVFGIIGGLVIHARWPTAVESGGIVILIAGVLLTIRVFHEGRSRSSRCHVQDA*