ggKbase home page

berkeley_reactor_200306_biofilm_scaffold_95231_137

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 145012..145779

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Martelella mediterranea RepID=UPI00036B4170 similarity UNIREF
DB: UNIREF100
  • Identity: 74.0
  • Coverage: 242.0
  • Bit_score: 347
  • Evalue 8.30e-93
Regulatory protein GntR HTH {ECO:0000313|EMBL:CCV15990.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.5
  • Coverage: 227.0
  • Bit_score: 342
  • Evalue 4.90e-91
GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 55.9
  • Coverage: 236.0
  • Bit_score: 258
  • Evalue 1.40e-66

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Mesorhizobium sp. STM 4661 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 768
TTGGTCCAGTTGCCGGTGAACGTCTTGGCGTCGACCTTCGCTCCGCTCCAGGAAGCCATCCACAAGCAGACGGCCAAGGAGATCATTCGCGACAAGCTCGTCTCGCTGATCGCCTCCGGCATCCTGCAGGTCGGCGACGAGCTGCCGAGCGAGCGGGAGCTGGCGGCCATGCTGTCGGTCAGCCGCGAGACGGTGCGCGGCGCCATCCAGCGCCTGGCCGGCGAAGGTGTCGTGCATGTCTCGCAGGGCGCGCGCACCCGCATCGCCACGGTCGACGTCGACGTGGCGGGCCAACGCATCGGCGTGACCAATCCCACGGCGATCAACGGCTACGACCTGGAATCCGTGCACGCGGCGCGGCTGCTGGTCGAGACCGCCGTCGTGGCCGACGCCGCGCTGCGCATGAGCCCCGAAGACGTCGCGCGGCTCGAGGCCTCGCTGGAGACCCAGCGCATGGCCCGCGAGGATCCCGTGCGCTTCATGATCTGCGACCGCGAGTTCCACCTGGCCATCTACTATGCCAGCGGCAACAAGCTGCTCGCCGATTTCGTGGTCGACCTCTACACCTACATGCTGGATCATCGCCGGACGGCGATGGGCAAGCCGGGCGCGATCGAGCGCAGCCTCGGCGATCATCGCGCCATCGTGGCGGCGCTGAGGCAGCGCGATCCCTCGGCGGTCGCCGCCGCCTTCCGCGAGCATATCCTGCGCATTCACGACACGACGCTCGCCGTCGGCCCGGCGCGACGGGGCGTCACGCCGCGATGA
PROTEIN sequence
Length: 256
LVQLPVNVLASTFAPLQEAIHKQTAKEIIRDKLVSLIASGILQVGDELPSERELAAMLSVSRETVRGAIQRLAGEGVVHVSQGARTRIATVDVDVAGQRIGVTNPTAINGYDLESVHAARLLVETAVVADAALRMSPEDVARLEASLETQRMAREDPVRFMICDREFHLAIYYASGNKLLADFVVDLYTYMLDHRRTAMGKPGAIERSLGDHRAIVAALRQRDPSAVAAAFREHILRIHDTTLAVGPARRGVTPR*