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berkeley_reactor_200306_biofilm_scaffold_103592_2

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(457..1491)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI0003750C05 similarity UNIREF
DB: UNIREF100
  • Identity: 70.8
  • Coverage: 339.0
  • Bit_score: 486
  • Evalue 2.00e-134
Sugar ABC transporter {ECO:0000313|EMBL:KGD96925.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.5
  • Coverage: 340.0
  • Bit_score: 485
  • Evalue 6.30e-134
frcB; ABC transporter, substrate binding protein (sugar) similarity KEGG
DB: KEGG
  • Identity: 72.5
  • Coverage: 334.0
  • Bit_score: 483
  • Evalue 2.80e-134

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Taxonomy

Rhizobium sp. YS-1r → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1035
ATGAGCCTGAAGAGTTTCGCGCGCCCTCTCGCCCTCGCGGGCGTCGCCGCCCTGGCGCTGATGAGCGGCTCGGCCTATGCCGCCGACAAGATCCTGATCGGCTTGATCACCAAGACCAACACCAACCCCTTCTTCGCCAAGATGAAGGAAGGCGCCGAGGCCAAGGCCAAGGAGCTCGGGGTCGACTTCCAGGCCTTCGCCGGCAAGTATGACGGCGACAACGACGCCCAGGTCGCCGCGGTGGAGAATCTCGTCGCCTCCGGTGCCAAGGGCATCCTGATCACCCCGAGCGACACCAAGGCGATCGTGCCGACCATCAAGAAGGCACGCGACGCCGGCGTGCTGGTGATCGCCCTCGACACGCCGCTCGACCCGATCGATTCCGCCGACGCCACCTTCGCCACCGACAATCTCAAGGCGGGCGAGCTGATCGGCGCCTGGGCCAAGGGCACGCTCGGCGACAAGGCGAAGGACGCGAAGATCGCCTTCCTCGACGCCATCGAAAGCCAGCCGACCGTCGACCTGCTGCGCGACCAGGGCTTCATGAAGGGCTTCGGCATCGACATCAAGAATCCGAACCGCTACGGCGACGAGGACGATCCGCGCATCGTCGGCCACCAGTGGGGCAAGGGCGCCGAGGAAGGCGGCCGCACCGGCATGGAGAACCTCCTGCAGAAGGAGCCGGGCGTGAACGTCGTCTACACCATCAACGAGCCGACCGCCGCCGGCGCCTACGAGGCGCTGAAGGCCGTGGGCCGGGAGAAGGACGTGCTGATCGTCTCGGTCGACGGCGGCTGCCCGGGCGTCAAGAACGTCAAGGACGGCGTCATCGGCGCCACCTCCCAGCAATATCCGCTGCTGATGGCGTCCATGGGCGTCGAGGCGGTGGTCGCCTTCGCCAAGGAAGGCAAGAAGCCGGAGAAGACCCCCGGCCTCGACTTCTTCAACACCGGCGTGTCGCTGGTCACCGACAAGCCGGTCGACGGCGTCCCCTCCATCTCGGTGGAGGAAGGCCTGAAGAAGTGCTGGGGCTGA
PROTEIN sequence
Length: 345
MSLKSFARPLALAGVAALALMSGSAYAADKILIGLITKTNTNPFFAKMKEGAEAKAKELGVDFQAFAGKYDGDNDAQVAAVENLVASGAKGILITPSDTKAIVPTIKKARDAGVLVIALDTPLDPIDSADATFATDNLKAGELIGAWAKGTLGDKAKDAKIAFLDAIESQPTVDLLRDQGFMKGFGIDIKNPNRYGDEDDPRIVGHQWGKGAEEGGRTGMENLLQKEPGVNVVYTINEPTAAGAYEALKAVGREKDVLIVSVDGGCPGVKNVKDGVIGATSQQYPLLMASMGVEAVVAFAKEGKKPEKTPGLDFFNTGVSLVTDKPVDGVPSISVEEGLKKCWG*