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berkeley_reactor_200306_biofilm_scaffold_103592_3

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 1690..2883

Top 3 Functional Annotations

Value Algorithm Source
ROK domain-containing protein n=1 Tax=Agrobacterium tumefaciens str. Cherry 2E-2-2 RepID=M8B3H5_RHIRD similarity UNIREF
DB: UNIREF100
  • Identity: 56.4
  • Coverage: 385.0
  • Bit_score: 410
  • Evalue 1.20e-111
ROK family transcriptional regulator {ECO:0000313|EMBL:KGM34429.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.2
  • Coverage: 396.0
  • Bit_score: 469
  • Evalue 3.10e-129
ROK family protein similarity KEGG
DB: KEGG
  • Identity: 46.9
  • Coverage: 386.0
  • Bit_score: 343
  • Evalue 5.30e-92

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Taxonomy

Inquilinus limosus → Inquilinus → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1194
ATGCGCGGACATCTGACCACGGCCGGCGCGGGGCCGGTGCTGTCGCTGATCCTGTCGCGGCAGGCCGCCTCGCGGCCGGCGCTGGAGCGGGTCTCCGGCCTGTCGCGCGCCACCATCGCCCAGCGCCTCGCCGTGCTGTTCGAGGCGGGGTTGATCGTCGAGGCCGAGGCGACGCTGCCGAGCGGCGGCCGCCCGGCCCGCACCATGGCGCTGAACACCGGCTTCGGCACGGTGCTCGCCGCCGATATCGGCGAGAGCGTGATCCGCATGGCGCTGACCGACCTCGCCCCCCGGGTCCTCGACCAGGTCCTGGTCGCCATGGACGTGGCCAGCGGGCCGGCGGCGATCCTCGAGGCGATCAGCCGCGGCTGCCGCGATCTCCTGGCGCGGCGGGCCGACTGGACGGCGCCGGTGCTCGGCCTCGGCCTCACCCTGCCGGCGCCGGTGGACTATGATCTCGGGCGCGTGGTCGGGCCGTCGGTGATGCGGGCCTGGGACGATTTCGACATCCGGGGCGTGCTGCGGCGCGAGCTCGCCATCGACGTCTTCGCCGACAACGACGTGAACCTGATGACGCTGGCCGAGCATCGCCTGATGTGGCCGGATCGAGACGATCTGCATTTCATCAAGGCCGGCACCGGCATCGGCAGTGGCATGATCATGGGCGGACGCATCTATCGCGGTGCCCGCGGCGCCTCGGGCGACATCGGCCATATCCAGTTCGACGCGCCGACGGCGCCGCTCTGCCGCTGCGGCAAGCGCGGCTGCCTCGAGGCGCGGGCGGCGGGGTGGGCGATCGCCCGCGATCTGCGCGAGGCCGGCTTCGAGGCCCGCGACGCCCGCGACGTGATGGCGCTGTTCGATGCCGGCGTCCCGGAGGCGATCCAGGGCGTGCGCGGCGCCGGCCGGGTGCTCGGCCAGGTGGCGGCCGACGTGGTCAGCGTGCTGAATCCGGCCGTGATCGTCGTCGGCGGCACGCTGGCCCGGGCCGGGGAGCACCTGCTCGCCGGCATCCGTGAGCACGTCTATCAGCGCTGCCTGCCGCTGGCGGTGCGCGACCTGGAGATCGTCGCCAGCCGCATGGGGAGCGATGCCGGCATCCTCGGCGCGGCGCAACTGGTGATCGACGAGCAGCTCAAGCCCGGCACGGTCGAGGGGCTGATCGAGAAGGCGCTGGAGAAGAGGGCGGCATAG
PROTEIN sequence
Length: 398
MRGHLTTAGAGPVLSLILSRQAASRPALERVSGLSRATIAQRLAVLFEAGLIVEAEATLPSGGRPARTMALNTGFGTVLAADIGESVIRMALTDLAPRVLDQVLVAMDVASGPAAILEAISRGCRDLLARRADWTAPVLGLGLTLPAPVDYDLGRVVGPSVMRAWDDFDIRGVLRRELAIDVFADNDVNLMTLAEHRLMWPDRDDLHFIKAGTGIGSGMIMGGRIYRGARGASGDIGHIQFDAPTAPLCRCGKRGCLEARAAGWAIARDLREAGFEARDARDVMALFDAGVPEAIQGVRGAGRVLGQVAADVVSVLNPAVIVVGGTLARAGEHLLAGIREHVYQRCLPLAVRDLEIVASRMGSDAGILGAAQLVIDEQLKPGTVEGLIEKALEKRAA*