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berkeley_reactor_200306_biofilm_scaffold_103592_24

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 19474..20583

Top 3 Functional Annotations

Value Algorithm Source
potG; putrescine transport system ATP-binding protein (EC:3.6.3.31) similarity KEGG
DB: KEGG
  • Identity: 71.6
  • Coverage: 363.0
  • Bit_score: 510
  • Evalue 3.00e-142
Putative spermidine/putrescine transporter subunit ATP-binding component of ABC superfamily tranporter n=1 Tax=Rhizobium mesoamericanum STM3625 RepID=K0Q5H0_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 71.4
  • Coverage: 364.0
  • Bit_score: 513
  • Evalue 1.60e-142
ABC-type spermidine/putrescine transport system, ATPase component {ECO:0000313|EMBL:EJL49675.1}; TaxID=1144312 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF122.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.3
  • Coverage: 364.0
  • Bit_score: 513
  • Evalue 2.30e-142

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Taxonomy

Rhizobium sp. CF122 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1110
ATGACCGCCGCCGTTTCCATCGAGAAGGCCACGAAGCGCTTCGGCGGCTTCACCGCGCTCGACGACGTCAGCCTGGAGATCGCGGCCGGCGAGTTCATCGTGCTGCTCGGACCCTCTGGCTGCGGCAAGACCACGCTGCTCTCCATCCTCGGCGGCTTCCTGACGCCGGGTGCCGGCCGCGTCCTGATCGGCGGGGTCGACATGACCCATGTGCCGCCGGCGCGGCGCCCGACCACCACCATGTTCCAGGACTATGCGCTGTTCCCCCACATGCGCCTTCAGGACAATGTCGGCTTCGGCCTGCGGATGCGCGGCACGGGCAAGCGCGAGCGCCTCGCCCGAGCGCTCGACTTCCTCGATCTCGTCGGCCTGCGGGCGGCGGCGCTGAAGAAGCCGCACGAGCTCTCCGGCGGCCAGCGCCAGCGCGTGGCGCTCGCCCGCGCCCTCGCCGTCGACCCGCAGGTGCTGCTGCTCGACGAGCCGCTCGGGGCGCTCGACCTCAAGCTCAGGCGCCAGATGCAGGACGAGCTCAAGGCCATCCAGAAGCGGGTCGGCACCACTTTCGTGCACGTCACCCACGACCAGGAGGAGGCGATGGCGATCGCCGACCGCATCGTGGTGATGAACCAGGGGCGGATCGAGGATGTCGGCCGGCCCGCCGACATCTATCTCAGGCCGCGCTCGCTGTTCGCCGCCGGCTTCATGGGCGAGGTCAATTTCCTCGACGCCACCGCGGCGGCAGTCGAGACGGATTGCGTGCGGGTGGCGATGCCGTGCGGCGAGGCCAGGCTGCCGGCGCAATGCTTCACGGCCGGCCTGCCGGCGCCGGGCGAGCCGGTGACGCTCTGCGTCCGGCCCGAGCATTTTCGCCGGGGCGACGTCCCGGACGAGGCCTTGGCGCTCGGCCCGGCGACGGTGACGGGTGCCGCCTTCTTCGGCACGCATTACCGCTGCCATGCGCGGCTCGCCTCCGCGTCCGGCCTGGAGCTCGTCATGCATCTGGAGCCGACCGCCCCGGTTGCGCAGGGCCAGCCGATCAGCCTTGCCGTCAAGGCCGCCGACGTCGTGGCGCTGCGGGGCGACGCCGCAGCGAGCCGGACCCCGCGCTGA
PROTEIN sequence
Length: 370
MTAAVSIEKATKRFGGFTALDDVSLEIAAGEFIVLLGPSGCGKTTLLSILGGFLTPGAGRVLIGGVDMTHVPPARRPTTTMFQDYALFPHMRLQDNVGFGLRMRGTGKRERLARALDFLDLVGLRAAALKKPHELSGGQRQRVALARALAVDPQVLLLDEPLGALDLKLRRQMQDELKAIQKRVGTTFVHVTHDQEEAMAIADRIVVMNQGRIEDVGRPADIYLRPRSLFAAGFMGEVNFLDATAAAVETDCVRVAMPCGEARLPAQCFTAGLPAPGEPVTLCVRPEHFRRGDVPDEALALGPATVTGAAFFGTHYRCHARLASASGLELVMHLEPTAPVAQGQPISLAVKAADVVALRGDAAASRTPR*