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berkeley_reactor_200306_biofilm_scaffold_103592_125

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 121138..121599

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, MarR family n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2IDL8_BEII9 similarity UNIREF
DB: UNIREF100
  • Identity: 82.9
  • Coverage: 146.0
  • Bit_score: 248
  • Evalue 4.10e-63
Transcriptional regulator {ECO:0000313|EMBL:KFL52004.1}; TaxID=60550 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia pyrrocinia (Pseudomonas pyrrocinia).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.9
  • Coverage: 152.0
  • Bit_score: 249
  • Evalue 2.60e-63
MarR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 82.9
  • Coverage: 146.0
  • Bit_score: 248
  • Evalue 1.20e-63

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Taxonomy

Burkholderia pyrrocinia → Burkholderia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 462
ATGCCGCCGATCGACCAGCCGCTCGGGATCGACCAATGCAACTGCTTCGCCATGCGGAAGGCGGCCCGGCAGATCTCCCGTTTCTATGACGCCCAGCTCGAGCCCACGGGCTTGCGGATCACGCAATTTCTCACCCTGGCGGCCTTGAACGAGTTGGGAAACGCTGCGGTCAACGCCCTGGCCGAACGGCTCGACATCGAACGGACGGCGATGGGGAAAATGGTCGGCTTCCTGGAGCGCGACGGCCTGGTCGCGGTCAAGCCGTCGCCCACCGACGGCCGGAGCCGCCTGGTCGAGCTCACCGAGGAGGGGCGCCGCCTGCATGAGAAAGCCTCCCCGTTCTGGCGGGAAGCGCAGCGGCAGTTCGCGCAACTGAACGGAGCGGACAACGTCGCAGCCCTGCGGCAAGGACTCGCGGAGATGACGGTCGGCGATCTGCCGCCCGGACCGTCCGACGCGTGA
PROTEIN sequence
Length: 154
MPPIDQPLGIDQCNCFAMRKAARQISRFYDAQLEPTGLRITQFLTLAALNELGNAAVNALAERLDIERTAMGKMVGFLERDGLVAVKPSPTDGRSRLVELTEEGRRLHEKASPFWREAQRQFAQLNGADNVAALRQGLAEMTVGDLPPGPSDA*