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berkeley_reactor_200306_biofilm_scaffold_103592_132

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 128627..130114

Top 3 Functional Annotations

Value Algorithm Source
Peptidase C14 caspase catalytic subunit p20 n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UNK7_METS4 similarity UNIREF
DB: UNIREF100
  • Identity: 40.2
  • Coverage: 503.0
  • Bit_score: 290
  • Evalue 1.80e-75
peptidase C14 caspase catalytic subunit p20 similarity KEGG
DB: KEGG
  • Identity: 40.2
  • Coverage: 503.0
  • Bit_score: 290
  • Evalue 5.00e-76
Peptidase C14 caspase catalytic subunit p20 {ECO:0000313|EMBL:ACA16115.1}; Flags: Precursor;; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 40.2
  • Coverage: 503.0
  • Bit_score: 290
  • Evalue 2.50e-75

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Taxonomy

Methylobacterium sp. 4-46 → Methylobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1488
ATGGTCGCCAAGGCGCTGCTTTGTTTGGTTTTCCTTGGCTTCTCTTTCCTTGCTTCCGTGCCGGCCGTCCTGGCCGAGGGGCGCGTCGCATTTGTCGTCGGCAACAACCTCTATTCCAATCTGGGGAAAGATCAGCAACTCGAACGAGCCGTGAACGACGCTCGTGCGGTGGGGGACGCGCTGATCGGCGACGGCTTCGAGGTCATACGGGGCGAAAATCTGACACGGTCCGAGTTGAATTCGAAATTCTTCGAGTTCATCCATCGGATTCAGCCCGGTGACCTGGCGTTTTTCTACTTTGCCGGACATGGCGTCGCGATCGATGGCGGCAATTTCATCTTACCCTCGGATGTGCCGGCTCCTCGGGCGGGCGATGAAAAGCTCATCGCGGCCCAATCGATCGGCGAGGAGGACATCATTGCCGACCTCCATGAAAAGGGTGCCCGCGTTTCCATCCTCGTCCTCGATGCGTGTCGCAACAATCCTTTCAGGCGCCCCGGCCTTCGCTCCGTGGGACTCGACCGGGGGCTGGCGCGAACCCCGGATGTCCAGGGCGTCTTTTCGATCTATTCGGCAGGCTTCGGTCAGACTGCGCTCGACTCGCTGTCCGATAGCGACACGGATCCAAACTCGGTGTTCACACGGGTCCTCGTGCGCTTGCTCACGAAGCCGGGACTGAGCCTCCAGGACATCGCCTACGAGGTGCGCGAGCAGGTTGCGGCCCTCGCGGAGACGCAGCGGCTCGAGCAGGTTCCCGCGACCTACGATCAGACCCTGCACGGACGCATCTACTTGAAGAGCCCACCGGAAACTGCGAAGGCGGACCAGCTCGCGTCGGCGCCGCCGGCTTGCTCGGCGGCTCAGAGCGATTTCCTGTCGGCCGATGCCGCCGGAGATGCGGCTGCGCTGCTTCTGAGCGCCGAGAGGTTCCCGGATTGCCCCTACGCCGCGGTGGCCCGGATCAGGGCGCAGCAGCTCCAGGCCAGGGTTGTCGCCGTCGCGGCGGCGCCGGCCGGCGATCCGACGGCGACCGACAGCCCCGGCGACGTGTGCGACCGGCTCGCGGGGCCGCGGGTCCGTCTCGAGCAGATCGATTCGCCCCGGGCGGTCGAAGCTTGTGAAGCGGCCGCCAAAGTTCTCGATGACGACAGCTGGACCTTCGATCTCGCCCGTTCCTACGAAGCCGGCGGAAAGTTCGAGGCTGCGGCGCACGCCTACAGGGTGGCGTTCGGTCTCGGCAACAGGGAAAGTCCGAGGAAGCTGCTTGAGCTCTGGTCCAATGACAAGATCTCTGCGGACAATATTACAGAGATACTGTCCTGGCTCTCATACGACCCTTCAGTGGCTCCGCGAAAGAAGATGGTTCGCATCGCGAACGATTTTTACCGGAATCGCGACTATGACGAGGCCAAGCGTTGGTACGAAGCTGTAGCAGGACATGCTCTCGACAGCACGACGATTTGGGATCTCAACCGGAAATATCAGTAG
PROTEIN sequence
Length: 496
MVAKALLCLVFLGFSFLASVPAVLAEGRVAFVVGNNLYSNLGKDQQLERAVNDARAVGDALIGDGFEVIRGENLTRSELNSKFFEFIHRIQPGDLAFFYFAGHGVAIDGGNFILPSDVPAPRAGDEKLIAAQSIGEEDIIADLHEKGARVSILVLDACRNNPFRRPGLRSVGLDRGLARTPDVQGVFSIYSAGFGQTALDSLSDSDTDPNSVFTRVLVRLLTKPGLSLQDIAYEVREQVAALAETQRLEQVPATYDQTLHGRIYLKSPPETAKADQLASAPPACSAAQSDFLSADAAGDAAALLLSAERFPDCPYAAVARIRAQQLQARVVAVAAAPAGDPTATDSPGDVCDRLAGPRVRLEQIDSPRAVEACEAAAKVLDDDSWTFDLARSYEAGGKFEAAAHAYRVAFGLGNRESPRKLLELWSNDKISADNITEILSWLSYDPSVAPRKKMVRIANDFYRNRDYDEAKRWYEAVAGHALDSTTIWDLNRKYQ*