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berkeley_reactor_200306_biofilm_scaffold_103592_148

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(144394..145110)

Top 3 Functional Annotations

Value Algorithm Source
Ribose-5-phosphate isomerase A {ECO:0000256|HAMAP-Rule:MF_00170, ECO:0000256|SAAS:SAAS00020824}; EC=5.3.1.6 {ECO:0000256|HAMAP-Rule:MF_00170, ECO:0000256|SAAS:SAAS00087684};; Phosphoriboisomerase A {ECO:0000256|HAMAP-Rule:MF_00170}; TaxID=28095 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia gladioli (Pseudomonas marginata) (Phytomonas marginata).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.2
  • Coverage: 238.0
  • Bit_score: 303
  • Evalue 1.80e-79
rpiA; ribose-5-phosphate isomerase A (EC:5.3.1.6) similarity KEGG
DB: KEGG
  • Identity: 57.4
  • Coverage: 237.0
  • Bit_score: 273
  • Evalue 4.00e-71
Ribose-5-phosphate isomerase A n=1 Tax=Rhodococcus opacus (strain B4) RepID=C1ARR7_RHOOB similarity UNIREF
DB: UNIREF100
  • Identity: 57.4
  • Coverage: 237.0
  • Bit_score: 273
  • Evalue 1.40e-70

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Taxonomy

Burkholderia gladioli → Burkholderia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 717
GTGCTGCAGCCCAGGACCGAGCAGGACAAGGCCAAGATCGCCGCCGGCCGCAAGGCCATCGCCACCTATCTCAGGAACGACATGCGGATCGGCCTCGGCTCGGGCACGACCTCCCACTGGTTCGTCCGCGCGCTCGGCGAGGAGGTGCGCCAGGGCCTGCGCATCGCCGGCGTGCCGACCTCGAACGCCACGCGCGAGGTGGCGCTGGAGGCCGGCGTGCCGCTGCTCGACCTCAACGACGTGACGGAGCTGGAGATCACGCTCGACGGGCCGGACGAGGTCGACCGCTCCGGCCGGATGATCAAGGGCGGCGGCGCCTGCCTCTTGTGGGAGAAGATGGTGGCGCGCGCCTCCCGCCGCATGGTCTGCATCGCCGACGACAGCAAGATCGTCGAGCGGCTCGGCCGCTTCCCCCTGCCGATCGAGGTGATCCGCTTCGGCTGGCGCAACACCGCCCATCAGCTGCAGAAGCTCTTTTCCGAGTTCGGCTATGGGGCGGTGCCGATCGTGCTGCGCGGCGGGGAGGAGACGCCGATCCTGACCGACAGCGCTCACTACATCCTCGACTGCCATCTCGTGGCGATCGGCGACCCCGACCGGCTGGCCCCGCGCTTCAACCAGATTCCGGGCGTGGTCGAGCACGGGCTGTTCGTCGGCATCGCCGCCGAGATGGTGGTGGGCCATGCCGACGGCAGCGCCGAGGTGGTGACGTTCTGA
PROTEIN sequence
Length: 239
VLQPRTEQDKAKIAAGRKAIATYLRNDMRIGLGSGTTSHWFVRALGEEVRQGLRIAGVPTSNATREVALEAGVPLLDLNDVTELEITLDGPDEVDRSGRMIKGGGACLLWEKMVARASRRMVCIADDSKIVERLGRFPLPIEVIRFGWRNTAHQLQKLFSEFGYGAVPIVLRGGEETPILTDSAHYILDCHLVAIGDPDRLAPRFNQIPGVVEHGLFVGIAAEMVVGHADGSAEVVTF*