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berkeley_reactor_200306_biofilm_scaffold_102636_14

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(13493..14284)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Agrobacterium tumefaciens 5A RepID=H0HGZ6_RHIRD similarity UNIREF
DB: UNIREF100
  • Identity: 78.2
  • Coverage: 248.0
  • Bit_score: 394
  • Evalue 4.70e-107
Uncharacterized protein {ECO:0000313|EMBL:EHJ95592.1}; TaxID=1107544 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens 5A.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.2
  • Coverage: 248.0
  • Bit_score: 394
  • Evalue 6.50e-107
hutC; histidine utilization repressor similarity KEGG
DB: KEGG
  • Identity: 45.7
  • Coverage: 245.0
  • Bit_score: 211
  • Evalue 1.60e-52

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Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 792
GTGAGCGAGAACGAAGTTTCAGCGAGGGCGCCCCTGTCCGAGGACGATACCCAGCCGGCCAGGCAATCCATGCCTCTCTACGCGGAAATCCAGCGCGGCATCGAGACCAAGATCGCGACCGGCGAATGGGGGCCGGGAACGCGCATCCCCTCGGAGCTCGAGCTGGTCGAGATCTACAAATGCTCGCGGATGACGGTCAACAAGGCCCTGTCGAGCCTGGCGGCGGCCGGCATGATCACGCGCAAGCGCAAGCTGGGCTCCTACGTGGCGCCGCCGCGCCTGGAAGAGCCCCTGATGCACATCCAGGACATCCGCGCCGAGATCCTGGCGATCGACCGGACCTACAGCTTCGAGATCAGCAATCGCAGCATCCGCAAGGTGACGGAGGCGACCGACGCCCGGCATGTCCGCGTGCCCATCGGCACCCGGCTCTTGTTCATGGAGGTGATGCACTATGCCGACAGCCTGCCCTTCACCATGGAGACCCGCCAGATCAACCTCGACGTGGTGCCGCAGGCCGAGCGCCTCCAGTTCAAGGACGAGCCGCCGGGAAGCTGGCTGCTGAAGAACGTGTCCTTCAGCGAAGGCGAGCACTCGATCCGGGCGATCTCCGCCGATGCCATGATGGCCAAGAAGCTGCAGGTGGTGGAGCGCACCGCCTGCATTTCCATCGCCCGGCGCACCTGGCTCAACGGTGACCTCATCACCTTCGTGCGGCTGATCTATCCCGGCGACCGCCACCGCTTCGTCGTGCGCTTCACGCCGTCCGCGCCGGTGCACGGACCGCCCTGA
PROTEIN sequence
Length: 264
VSENEVSARAPLSEDDTQPARQSMPLYAEIQRGIETKIATGEWGPGTRIPSELELVEIYKCSRMTVNKALSSLAAAGMITRKRKLGSYVAPPRLEEPLMHIQDIRAEILAIDRTYSFEISNRSIRKVTEATDARHVRVPIGTRLLFMEVMHYADSLPFTMETRQINLDVVPQAERLQFKDEPPGSWLLKNVSFSEGEHSIRAISADAMMAKKLQVVERTACISIARRTWLNGDLITFVRLIYPGDRHRFVVRFTPSAPVHGPP*