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berkeley_reactor_200306_biofilm_scaffold_102636_16

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(16246..17169)

Top 3 Functional Annotations

Value Algorithm Source
Rcorf12 n=1 Tax=Agrobacterium rhizogenes RepID=A8VZU0_AGRRH similarity UNIREF
DB: UNIREF100
  • Identity: 75.2
  • Coverage: 302.0
  • Bit_score: 483
  • Evalue 8.90e-134
Rcorf12 {ECO:0000313|EMBL:ABW33569.1}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium rhizogenes.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.2
  • Coverage: 302.0
  • Bit_score: 483
  • Evalue 1.20e-133
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 56.1
  • Coverage: 303.0
  • Bit_score: 349
  • Evalue 5.70e-94

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Taxonomy

Agrobacterium rhizogenes → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 924
ATGGCGGTGGTCGCCGAGCTCGCCGATGAGCTGAACCCGGAACTCTGCGAGGAGTTCTGGCAGGATCTGCCGTTCAAGGTGATGCAGGCCCATCCGGTGGTCTCCGGCGAGTCCCTCTATGCCTGGGCCCCGACGATCAGCACGGCGCCGGTGCGCCAGACGATCCGTCTTTCGGATTGCCGGCCAGGCGACCTGCGCTATTCGCAGAAGACCGGCAACAAGTTCTCCATCAACTACGGCCGGAGCACCGAGACCCTGGCCCAGCCGGTTCTCGGCAAGGTTCTGCCGGACTACCTGCATCTCCTGCCCGTCGTCGGCAAGGCGATCTGGAACAACCTGTTCTTCGCCAAGGAGCACATCTTCGTCGAGGTGAGCCCGCACGATCCGGCGCAGGCTTTCACCGGCAAGAGCCGCTTTGCCGGCCTCGAGGGCGTGGCCGCGGAATTCTACGCCGAAGCCAAGCGCATCCAGACGGTGGAGCCGGAGGACCTGCGCCGCATCCGGCTCGGCGAGATCGGCGAGACCGGCAATTACGGCCAGTACTTCACGGCCTGGGACTTCGCCAACGGCATGCTGCGCGACCACATCATGTACACCGCGTTCAACTGGGTGAAATATGTCGACATGCTCTCGCACAAAGACCTGATCGCGGTCGTCGACACCGAGGACGAGCCCTATTCGGAATATCTCGGCTTCTCCGGCCTGACGACGCTGCGCGACTTCTCGCTGAAGCTGCGCGCCGCGATCCGGGACACCGAGGACAAGGAGGAACTGCGCGCCCTGCTCCGGACCTTCGTCATGTACGGCAATCGCCTGTGCGCCTGGTCCTATCACTATTTCCCCTGGCATATCGGCGTGTTCTTCGGCCGCAGCGTCAGGGGCCAGGAGCTCCCCGGCCGCTTCAACCTGACGAATCCGGCCTGA
PROTEIN sequence
Length: 308
MAVVAELADELNPELCEEFWQDLPFKVMQAHPVVSGESLYAWAPTISTAPVRQTIRLSDCRPGDLRYSQKTGNKFSINYGRSTETLAQPVLGKVLPDYLHLLPVVGKAIWNNLFFAKEHIFVEVSPHDPAQAFTGKSRFAGLEGVAAEFYAEAKRIQTVEPEDLRRIRLGEIGETGNYGQYFTAWDFANGMLRDHIMYTAFNWVKYVDMLSHKDLIAVVDTEDEPYSEYLGFSGLTTLRDFSLKLRAAIRDTEDKEELRALLRTFVMYGNRLCAWSYHYFPWHIGVFFGRSVRGQELPGRFNLTNPA*