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berkeley_reactor_200306_biofilm_scaffold_102636_22

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 22289..23116

Top 3 Functional Annotations

Value Algorithm Source
Rcorf17 n=1 Tax=Agrobacterium rhizogenes RepID=A8VZV2_AGRRH similarity UNIREF
DB: UNIREF100
  • Identity: 80.9
  • Coverage: 277.0
  • Bit_score: 438
  • Evalue 3.80e-120
Rcorf17 {ECO:0000313|EMBL:ABW33574.1}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium rhizogenes.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.9
  • Coverage: 277.0
  • Bit_score: 438
  • Evalue 5.40e-120
ABC transporter similarity KEGG
DB: KEGG
  • Identity: 38.6
  • Coverage: 251.0
  • Bit_score: 185
  • Evalue 1.30e-44

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Taxonomy

Agrobacterium rhizogenes → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 828
ATGACAGCCCTCGCCCGAAACACCGGCCGGCCTGCGCGACTGCGCCTTCCGATGGGCCTCGGCATCGCGGCGTTCTGCGGCTTCGTGTTCGTCGCCGCGCCGCTGGTCGTGGTCGCCGGTGCCGCCCTCAATGCCGACGCCATGGTGTTTCCGCCGCGATCCCTGACCCTGCATTGGATGATCGCGGCGCTGACCGATCGAAGCTTCGTCGATGCCGCGCTGGTCAGCCTGGCCGTCGCCGTCGTGGCCGCGGCCGTCTCGACCATCTTCGCCCTGCCGGTCGCCCTGCGGCTGCGCAAGGCATCGCCCTTCGTCGCCAGCGTGCTGACGCTGTCCTTCATGGGGCCGCTGCTGGTGCCCTCGGTGATCTTCGCGCTCGCGCTCTATTCGGTGATCATGTCCGCGTTCGGGGTCACGAGCCTGGCGGCGCTGATGATCGGCCACGTCATCATCACCATGCCCTATCCCGTCCGGACCATCACCGCCGTCATGGACAACCTCGACCCGGCGCTGGAGGATGCGGCGGGCAGCGTCGGCGCGACGCCCTGGCGGACGTTCCTGTCGATCACCCTGCCGCTGATCAAGCCGGGCGTGATCGCCGGCTTCCTGTTCGCCTTCATCACGTCCTGGAACGATTTCTCCATCTCGATCTTCCTGACGCCGCGCCAGCTCCAGCCGCTGCCGATCAGGATCTACGAGTACCTGCTCTATCAATACCGGCCGCTGATCGCCGCCGTCTCCACCTGGTCGGTGATCGGCTCGGCGATCATCGTCATCGTCATCGACAGGCTGGTCGGGCTGAACGTCTTCTCCGGCCGCAGGGGCTGA
PROTEIN sequence
Length: 276
MTALARNTGRPARLRLPMGLGIAAFCGFVFVAAPLVVVAGAALNADAMVFPPRSLTLHWMIAALTDRSFVDAALVSLAVAVVAAAVSTIFALPVALRLRKASPFVASVLTLSFMGPLLVPSVIFALALYSVIMSAFGVTSLAALMIGHVIITMPYPVRTITAVMDNLDPALEDAAGSVGATPWRTFLSITLPLIKPGVIAGFLFAFITSWNDFSISIFLTPRQLQPLPIRIYEYLLYQYRPLIAAVSTWSVIGSAIIVIVIDRLVGLNVFSGRRG*