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berkeley_reactor_200306_biofilm_scaffold_127933_2

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 1172..2143

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain n=1 Tax=Caulobacter sp. AP07 RepID=J2GKL1_9CAUL similarity UNIREF
DB: UNIREF100
  • Identity: 62.8
  • Coverage: 323.0
  • Bit_score: 412
  • Evalue 3.50e-112
Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain {ECO:0000313|EMBL:EJL30675.1}; Flags: Precursor;; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.8
  • Coverage: 323.0
  • Bit_score: 412
  • Evalue 4.90e-112
rhaS; AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 48.9
  • Coverage: 313.0
  • Bit_score: 281
  • Evalue 2.00e-73

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Taxonomy

Caulobacter sp. AP07 → Caulobacter → Caulobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 972
TTGCCGATGTCCCGACCGGTCCATGTGGTGATCTGGCTGCCGTCGACCTTCTATTCCGCCGTCGCCGCCACGCTTGTCGAAATGCTCGAGCTGGTGAACGGCATCCGGCGTTCCCAGGTCCTGTCGTTCGAGTTCGTGGCGCGGCAGGCGGTCGCCACCTCGACATCGGGGATCTCCTTCGAGACCCGGCCCGCACCGTCCCGGCCGATGGACGTGCTCATCCTCCTCGCCATGCCCGGACTGCAGGTGCCGGAGCTGCTGCGGTCCCTGGAAGAGGAGAGCCGGCATGCGAGGCCCCTGCTGGATGCGGCCCGGCACGACGGCGCGATCATCGCCGCCCATTGCGGCGCGGGCTATTTCCTGGCCGATGCCGGCCTGCTCGACGGCAAGCGGGCAACCATCTCCTGGTGGTTGAAGACGGATGCCCTGCGCCGCTTCCCGCGCGTGCGGTGGGACCCCTCGCGCCTCCTGATCCGGCAGGGCCGGATCTACACCTGCGGCGGCGGTTTTTCCGGCCTCGAGCTCGGCAAGGCGCTGCTGAAAGATCTCGGCTTCGCCAGGGAAGAGCGCATCGTGCGCAAGCTCCTGGTCCTGCCGCCGTCGCGGCAGCTCCAGACCCCCTATGAGTTTCCGCTCCAGGACGTGGCGCCGGCGCCCCAGTCGTTCCGGGAGCAGCTCGAGGCCCTGTCACGAGATCGTCTGCCGACGCTCGATCTCACCGTCCTCGCCGACAGGATGGGGCTGTCGCCGCGGACCTTGTCGCGCCGGTTTGCCGAGGACCTGCAGACAAGCCCCGGGCGATGGCTCCAGGATCGGCGCCTGGACATGGCGCGGGAGCTCCTGGAACGGACGACGCTCGCCATTTCAGAGGTCTGCTATCGCGTCGGCTATCAGGACGTGGCCTCCTTCAGCCGGCTCTTCACCCGCACGACCGGCCTGCCGCCCGGCGAGTACCGCCGCCAGAGCCGGTAG
PROTEIN sequence
Length: 324
LPMSRPVHVVIWLPSTFYSAVAATLVEMLELVNGIRRSQVLSFEFVARQAVATSTSGISFETRPAPSRPMDVLILLAMPGLQVPELLRSLEEESRHARPLLDAARHDGAIIAAHCGAGYFLADAGLLDGKRATISWWLKTDALRRFPRVRWDPSRLLIRQGRIYTCGGGFSGLELGKALLKDLGFAREERIVRKLLVLPPSRQLQTPYEFPLQDVAPAPQSFREQLEALSRDRLPTLDLTVLADRMGLSPRTLSRRFAEDLQTSPGRWLQDRRLDMARELLERTTLAISEVCYRVGYQDVASFSRLFTRTTGLPPGEYRRQSR*