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berkeley_reactor_200306_biofilm_scaffold_127933_3

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(2174..3544)

Top 3 Functional Annotations

Value Algorithm Source
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.3
  • Coverage: 457.0
  • Bit_score: 436
  • Evalue 3.40e-119
hypothetical protein n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI00037C4E07 similarity UNIREF
DB: UNIREF100
  • Identity: 54.3
  • Coverage: 446.0
  • Bit_score: 455
  • Evalue 5.00e-125
two-component sensor histidine kinase protein similarity KEGG
DB: KEGG
  • Identity: 52.3
  • Coverage: 457.0
  • Bit_score: 436
  • Evalue 6.80e-120

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Taxonomy

Rhizobium tropici → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1371
ATGTCCTTAAGGCGCCTGGCTGACGTTTGCAGGACCACCAGCTTCCGCCTGGCGACCCTCTTCCTGGCGCTGTTCAGCCTGGCCTCGCTCGCGCTCTTCGGCTTCCTGTTCTTCGAGGTCAAGAGCTTCATGCGCGACAAGATCGACGAATGGGTGCTGCGCGAGGAGCAGGAGATCGTCCGCCTCGCCCCGGCCGAGGTCAAGGACCGGCTGCAGGCGCGGATCGTCGGCGGCGCCAATCCCGAACGGCCGATGGCGCTGTTCGACCGCGATGGCGCGCGCGTCGCCGGCAGCGCCATCACGCCGCTTGCGCCCTTGGCGGCCAACCCTGCTCCCTTCGAGTTCCGGCTCGGCGGCGTGCCGCACGAGACGCATTTCCGCGGCGTGGTCCGGCAGCTGCCGTCGGGTGACATGCTCGTCGTCGCCCAGGGCATCGGCGAGCTGCGCGAGTTCAACGAGGTCCTGGTCAACGCGATGATCCTGGCCGGAGCGGTGACGGCTCTGCTCGGACTGGCGGGCGCCGTCCTGACCGGCGCCGCCGCCGTGCGCCAGATCGACGCGATCACAGGCGCGACGCGGGACATCATCACCGGCGACCTCTCCCGGCGCCTGCCCACCGACGGCACCTCGGGCGACGTCGCCCGCCTGGCCCGGGTCGTCAACGAGATGCTCGCCGAGATCGAGCGGTTGATGCGCGAGGTGAAAGGCGTCTGCGACAACATCGCCCACGACCTGCGCACGCCGCTGACCCGGCTGCTGGCCGGCCTGGAGCGGGCGCAGCGCCGGGCCGCGACCCCGGCCGACTATGCCGAGGGGATCGACGAGGCGATCGGCGAAACCCGGGGGATCCTGAAGACCTTCGGCGCGCTGCTGCGGATCTCCGAAGTCGAGGACGGCGTGCGCCGATCCGGATTCACCCGTGTCGACCTCGCCGAAGTCACGTCCGACGTCGTGGAGTTCTATGAACCCTTCTCCGAGGAAAAAGGGGTCGCGCTGCAGCTTGCCGCCGACAGCGAGCCATTGCCGGACTTCTCGGGAGACCGCAATCTCCTGTTCGAGGCCTTCGGTAACCTCATCGACAACGCCATCAAGTTCACGCCGGCCGGCGGAAGCGTCCGCGTCAGGAGCTTTCGTGAGGGCGACCGCGTCGGCGTGACCGTTTCCGACACCGGGCCGGGCATTCCCAGCGAGGAGCAGGACGCGGTGCTGCGCCGCTTCTATCGCGCCGAGAAGAGCCGGCATCGGCCCGGCAACGGGCTGGGCCTCAGCCTCGTCGCCGCCGTCGCCCGCCTGCACGGGATGGACGTCGTCTTCGGCGGCGAGGCAGCCGGATGCAGCATCACCTTGCAATATCGCCCTGCCCGCACCTGA
PROTEIN sequence
Length: 457
MSLRRLADVCRTTSFRLATLFLALFSLASLALFGFLFFEVKSFMRDKIDEWVLREEQEIVRLAPAEVKDRLQARIVGGANPERPMALFDRDGARVAGSAITPLAPLAANPAPFEFRLGGVPHETHFRGVVRQLPSGDMLVVAQGIGELREFNEVLVNAMILAGAVTALLGLAGAVLTGAAAVRQIDAITGATRDIITGDLSRRLPTDGTSGDVARLARVVNEMLAEIERLMREVKGVCDNIAHDLRTPLTRLLAGLERAQRRAATPADYAEGIDEAIGETRGILKTFGALLRISEVEDGVRRSGFTRVDLAEVTSDVVEFYEPFSEEKGVALQLAADSEPLPDFSGDRNLLFEAFGNLIDNAIKFTPAGGSVRVRSFREGDRVGVTVSDTGPGIPSEEQDAVLRRFYRAEKSRHRPGNGLGLSLVAAVARLHGMDVVFGGEAAGCSITLQYRPART*