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berkeley_reactor_200306_biofilm_scaffold_127933_10

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 12205..13155

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator n=1 Tax=Rhizobium sp. AP16 RepID=J2LBP6_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 73.3
  • Coverage: 300.0
  • Bit_score: 448
  • Evalue 4.30e-123
Transcriptional regulator {ECO:0000313|EMBL:EJK84891.1}; Flags: Precursor;; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. AP16.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.3
  • Coverage: 300.0
  • Bit_score: 448
  • Evalue 6.00e-123
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 72.3
  • Coverage: 300.0
  • Bit_score: 445
  • Evalue 7.80e-123

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Taxonomy

Rhizobium sp. AP16 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 951
ATGGAGAGCCTGAGCGGACTGGCGGCTTTCGTTCATGCCGCCGAGCAGCGCAGCTATGTCGCTGCGGGCCGCATTCTCGGCGTGTCCTCCTCAGCCGTCGCCAAGAGCGTCGCGCGGCTCGAGGCCAGGCTCGGCGTCCGGCTGCTCAACCGGACGACGCGCAGCGTCGGGCTGACGGAGGAGGGGGCCCTCTTCCACGAGCGCTGCAAGCGCATTCTCGATGAGATCGGGGACGCCGAGGCGGCCCTGTCGCAGAGCCGGGCGCGGCCGACGGGACGGCTGCGGGTCAGCGTCCCCCAGATCGTCGGCCATCACCTGCTGCTGCCGCATCTGCCTGATTTCATGGCTCGCTTCCCCGATATCGAGCTCGACATCGACTTCGAGGACCGGGTCGTCGACATCGTCGCCGAGGGGCTCGATGTCGCCGTGCGCAGCGGCGATCTCGCCGACACGCGGCTGATCGCCCGGACGATCGGCGAGCAGCATTTCGTGGTCTGCGGCAGTGATGGCTATGTGGAACGGCACGGCGAGCCGCAAGCGCCGGCCGATCTGGCTGGCCATGCCTGCATCCACTTCAAGTACCCTTCCAGCGGCCGGCTGGCGCCCTGGGCCTTCCGGCCGCCCCATGACGATCCGCGCCTGCCGGCCAGCCTGGTCTTCAACAACACCGATGCCGGGCTGCGGGCGGCCATGGATGGCCTCGGCCTCGCCCATCTCCCGGTCTATGTCGCGCTGCCGATGATCGAGGCCGGTGCGCTTCGCCCGGTCCTGACCGGCTTCATGCGGCCCTTCGGCACGCTGTCGCTGGTCTGGCCGTCGAACCGCCAGCTTTCGCCCAAGGTCCGGGCCTTCGTCGACTTCACCATCGAACGCCTGCGGGACAGGCCGGCCGCGTTCGAGCCGGTGCAGCCGCCGAGCCGCGATCCGGCCGGCCTCCCGCTCAGTCCCTGA
PROTEIN sequence
Length: 317
MESLSGLAAFVHAAEQRSYVAAGRILGVSSSAVAKSVARLEARLGVRLLNRTTRSVGLTEEGALFHERCKRILDEIGDAEAALSQSRARPTGRLRVSVPQIVGHHLLLPHLPDFMARFPDIELDIDFEDRVVDIVAEGLDVAVRSGDLADTRLIARTIGEQHFVVCGSDGYVERHGEPQAPADLAGHACIHFKYPSSGRLAPWAFRPPHDDPRLPASLVFNNTDAGLRAAMDGLGLAHLPVYVALPMIEAGALRPVLTGFMRPFGTLSLVWPSNRQLSPKVRAFVDFTIERLRDRPAAFEPVQPPSRDPAGLPLSP*