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berkeley_reactor_200306_biofilm_scaffold_127933_11

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(13145..13858)

Top 3 Functional Annotations

Value Algorithm Source
transcriptional regulator n=1 Tax=Bradyrhizobium japonicum RepID=UPI00037917CA similarity UNIREF
DB: UNIREF100
  • Identity: 64.4
  • Coverage: 233.0
  • Bit_score: 290
  • Evalue 8.50e-76
Putative Transcriptional regulator, GntR family {ECO:0000313|EMBL:CCE12089.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.8
  • Coverage: 236.0
  • Bit_score: 290
  • Evalue 2.00e-75
GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 62.7
  • Coverage: 233.0
  • Bit_score: 286
  • Evalue 4.60e-75

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Taxonomy

Bradyrhizobium sp. STM 3843 → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 714
ATGCCCATTGCCTCGTCCCTGATGCCGACGAGCGAACCGCGGGCGCGGCTGGACCGCGATCGCCAGGCGGCGCCGCAGCTGTTCGAGCGGCTGCGGGAGGCGATCATCTCGCTCGAGCTCACGCCGGGCACGACGCTGTCGCGCACCGAGATCGCGGCGCAGTTCGGCGTCAGCCAGACGCCGGTGCGCGATGCGCTGATGCGCCTGGACGAGGAGGGCCTGGTCGAGGTGTTCCCGCAGCACGCCACGGTGGTCAGCCCGATCGACCTCCGATCGGCGCAGCAGGCGCATGTCCTGCGCCGCTCCCTGGAGCTGGAGATTGTCCGCTCGCTCGCCCTCGACCCGCCGCCGGCACTCGTCGCCGCGCTCGACGGCCTGATCGCGCAGCAGGCGCTTGCCGCCGGCGCCGGCGACTTCGAGACCCTGACGACGCTGGACCGGCTGTTCCACCAGCGCCTCTACGAGGCTGCCGGCCTGCACGAACTCTGGCTGCTGGTGCGCAGCCGCAGCGGCCATATCGACCGCCTGCGCCGGCTGCACCTGCCGACGCCCGGCAAGGCGCAGGACATTCTGCGCCACCACCGGCTGATCCTCGCGTCGATCGCCGGCGGGCGGCCGGACGAGGCGCAGCGGCATCTGCGCGACCATCTCTCGGGCACCCTCGCCCATGTCGCCGAGATCCGCGCCCGCTACCCCGCCTATATCAGGGACTGA
PROTEIN sequence
Length: 238
MPIASSLMPTSEPRARLDRDRQAAPQLFERLREAIISLELTPGTTLSRTEIAAQFGVSQTPVRDALMRLDEEGLVEVFPQHATVVSPIDLRSAQQAHVLRRSLELEIVRSLALDPPPALVAALDGLIAQQALAAGAGDFETLTTLDRLFHQRLYEAAGLHELWLLVRSRSGHIDRLRRLHLPTPGKAQDILRHHRLILASIAGGRPDEAQRHLRDHLSGTLAHVAEIRARYPAYIRD*