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berkeley_reactor_200306_biofilm_scaffold_127933_23

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(24824..26080)

Top 3 Functional Annotations

Value Algorithm Source
polyamine ABC transporter substrate-binding protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00035FFBAA similarity UNIREF
DB: UNIREF100
  • Identity: 77.0
  • Coverage: 418.0
  • Bit_score: 627
  • Evalue 8.90e-177
ABC transporter permease protein similarity KEGG
DB: KEGG
  • Identity: 75.1
  • Coverage: 418.0
  • Bit_score: 620
  • Evalue 2.30e-175
ABC transporter permease protein {ECO:0000313|EMBL:AJD44747.1}; TaxID=1418105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium gallicum bv. gallicum R602.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.1
  • Coverage: 418.0
  • Bit_score: 620
  • Evalue 1.20e-174

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Taxonomy

Rhizobium gallicum → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1257
ATGACCACAGCCTTCGCTGACATTGCGGACCATCCGGCGGACGACAGCGTTGCGCTCCCCCGGCGCCTGCGCCGGCTCCGCCGCCGCGGGCAGGCCAAGGCCCTGCTGCTGGTCGCGCCGCTGCTGCTCTTTCTCCTCGCCGTCTTCGTCGTGCCGATCGGCGCCCTGCTGACGCGCAGCGTCGACAACAGCGTCGTCCGGCAGGCGCTGCCGCAGACGGCGGTGGCCCTCGCCGCCTGGGATGGCGAAAGCGTGCCGGACGAGGCGGTCTACGCCGCCTTCGCCGCCGACCTCAAGGCCTCGCCGCGCGAGACGGTGGCCGAGGTCGCCAAGCGCCTCAACTACTACGAGGCCGGGCTGCGCTCGATGCTGCTCAAGACCGGCCGCCAGATCGGCCGCGCGCAGGCGCCCTGGCACGCCGCCTTCGTCGCCATCGACCCGGCCTGGGGCACGCCGCGCTACTGGCGGGTGCTGCGGCAGGCTCTGCCCGCCACCACGGATTTCTACCTGCTGGCGGCGCTCGACCTGCAGCACGACGACCGCGGCGCCATCGTCGGCGTGACGCCGGAAACCGCGGTGCATCGCCAGGTGCTGCTGCGCACCTTCGCGGTCAGCCTGTCGGTGACGCTGATCTGCCTGGCGCTCGGCTATCCCCTGGCCGCTCTGATCGCCCGCTCGCGCGGCGCGGTCGCGAACACGCTGCTGATCCTGGTGCTGCTGCCGTTCTGGACCTCGCTGCTGGTGCGCACCAGCGCCTGGGTGGTGCTGCTGCAGAGCCGCGGCGTGGTCAACGAGGCCCTGGCCTGGCTCGGCCTGATCGACCCGGCGCGCCCGCTCGACCTGATCTACAACCGGACCGGCGTGCTGATCGCCATGACCCATATCCTGCTGCCCTTCATGGTCCTGCCGATCTACAGCGTGATGAAGGGCATCCCCCCGGTCTATCTGCGCGCCGCCGCCTCGCTCGGCGCGCCGCCCGCGTCGGCCTTCCGGCACGTCTACCTGCCGATGAGCCTGCCCGGCGTCAGCGCCGGCTGCCTGCTCGTCTTCATCCTGGCGCTCGGCTACTACATCACCCCGGCGCTGGTCGGCGGGCCGCAGGACCAGATGGTCAGCTATTTCATCGCCTATTACGCCAACCAGGTCACCAACTGGGGCATGGCGGCAGCGCTCAGCGCCATCCTCCTGGTAGCGGTGCTGATCCTCTACGCCGTCTACAACCGCATCGTCGGCATCGACAGACTGAGGATGGGCTGA
PROTEIN sequence
Length: 419
MTTAFADIADHPADDSVALPRRLRRLRRRGQAKALLLVAPLLLFLLAVFVVPIGALLTRSVDNSVVRQALPQTAVALAAWDGESVPDEAVYAAFAADLKASPRETVAEVAKRLNYYEAGLRSMLLKTGRQIGRAQAPWHAAFVAIDPAWGTPRYWRVLRQALPATTDFYLLAALDLQHDDRGAIVGVTPETAVHRQVLLRTFAVSLSVTLICLALGYPLAALIARSRGAVANTLLILVLLPFWTSLLVRTSAWVVLLQSRGVVNEALAWLGLIDPARPLDLIYNRTGVLIAMTHILLPFMVLPIYSVMKGIPPVYLRAAASLGAPPASAFRHVYLPMSLPGVSAGCLLVFILALGYYITPALVGGPQDQMVSYFIAYYANQVTNWGMAAALSAILLVAVLILYAVYNRIVGIDRLRMG*