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berkeley_reactor_200306_biofilm_scaffold_127933_24

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(26151..27215)

Top 3 Functional Annotations

Value Algorithm Source
spermidine/putrescine ABC transporter substrate-binding protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000370505D similarity UNIREF
DB: UNIREF100
  • Identity: 85.8
  • Coverage: 353.0
  • Bit_score: 630
  • Evalue 6.80e-178
ABC transporter substrate-binding protein {ECO:0000313|EMBL:EJT02059.1}; TaxID=1132836 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CCGE 510.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.4
  • Coverage: 350.0
  • Bit_score: 626
  • Evalue 1.40e-176
spermidine/putrescine ABC transporter substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 85.1
  • Coverage: 349.0
  • Bit_score: 620
  • Evalue 2.60e-175

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Taxonomy

Rhizobium sp. CCGE 510 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1065
ATGAAGGGGAACGACATGATACGCAGATTTTCGCTTCTGCCGACCGCCATGCTTCTCGCGGGCCTGGCGACGCCGGCGCTCGCCGACGGCACGCTGACCGTGACCTCGTGGGGCGGCGCCTACACCAAGAGCCAGGAAAAGACCTATTTCGAGCCCTTCGCCAAGCAGACCGGCGTCAAGGTGCTGCAGGACGAATGGGACGGCTCGACGGCCAAGCTGAAGGGCATGGTCGAGACCAAGCAGGTGACCTGGGACATCGTCGACGTCGAGCCGGGCCACGCCCTGCAGGGCTGCGACGAGAACTGGCTGGAAAAGATCGACTATTCCAAGCTGGGCGGCAAGGCGGCCTTCATCGACGGCGCCGCGATGGACTGCGCCGTCGCCACCATCGTCTTCGGCACCATCTATGCCTATGACGCCGCGAAATTCCCGAACGGCGGCCCGACCACCATGGCCGACCTGTTCGACACCAAGAAATTCCCCGGCCCGCGGGCGCTGCGCAAATCGCCCAAGACCACGCTGGAATTCGCGCTGATCGCCGACGGCGTGGCGCCCAAGGACGTCTACACCGTGCTCGGCACGCCGGAGGGCGTCGACCGCGCCTTCAAGAAGCTCGACACCATCAAGAAGGACGTCAAGGTGTGGTGGACTGCCGGCGCCCAGCCGCCGCAACTGCTCGCCGACGGCGAGGTGGTGATGACCACCGCCTGGAACGGCCGCATCTACGACGCGGTGAAGAACAGCGGCAAAAACTTCAAAATCGTCTGGGACGGCCAGGGCATGGACTTCAACCTCTGGGCCGAGCCGGTCGGCTCGAAGAACAAGGCCGAGGCCGACAAGTTCATCGCCTTCACCATGAATCCCGACGTGATGGCGCAGCAGTCGCGATACATCTCCTACGGCCCAACCCTGAAGGCAGCGATCGCCAAGGTGCCGGCCGAAATCCTGCCTGACCTGCCGACGGCGCCGGAGAACACGAAGACCGCCTTCGTGGTCTCGTCCGAGTTCTGGGCGGACCATGACGAGGAGTTGACCGAACGCTTCAACACTTGGCTGGCGAAATAG
PROTEIN sequence
Length: 355
MKGNDMIRRFSLLPTAMLLAGLATPALADGTLTVTSWGGAYTKSQEKTYFEPFAKQTGVKVLQDEWDGSTAKLKGMVETKQVTWDIVDVEPGHALQGCDENWLEKIDYSKLGGKAAFIDGAAMDCAVATIVFGTIYAYDAAKFPNGGPTTMADLFDTKKFPGPRALRKSPKTTLEFALIADGVAPKDVYTVLGTPEGVDRAFKKLDTIKKDVKVWWTAGAQPPQLLADGEVVMTTAWNGRIYDAVKNSGKNFKIVWDGQGMDFNLWAEPVGSKNKAEADKFIAFTMNPDVMAQQSRYISYGPTLKAAIAKVPAEILPDLPTAPENTKTAFVVSSEFWADHDEELTERFNTWLAK*