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berkeley_reactor_200306_biofilm_scaffold_127933_29

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 32893..33159

Top 3 Functional Annotations

Value Algorithm Source
xseB; Exodeoxyribonuclease small subunit (EC:3.1.11.6) similarity KEGG
DB: KEGG
  • Identity: 65.9
  • Coverage: 82.0
  • Bit_score: 105
  • Evalue 7.00e-21
Exodeoxyribonuclease 7 small subunit {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198686};; Exodeoxyribonuclease VII small subunit {ECO:0000256|HAMAP-Rule:MF_00337}; TaxID=696125 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bartonellaceae; Bartonella.;" source="Bartonella clarridgeiae (strain CIP 104772 / 73).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.9
  • Coverage: 82.0
  • Bit_score: 105
  • Evalue 3.50e-20
exodeoxyribonuclease VII small subunit n=1 Tax=Xanthobacteraceae RepID=UPI00035D14D5 similarity UNIREF
DB: UNIREF100
  • Identity: 74.3
  • Coverage: 74.0
  • Bit_score: 109
  • Evalue 1.00e-21

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Taxonomy

Bartonella clarridgeiae → Bartonella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 267
ATGCCCAATTTGTTTCCGTCCGAGTCCACCCCGTCCGACATTGCCGCGCTCTCCTTCGAGAAGGCGCTCGCCGAGCTCGATCAGATCGTCAAGAGCCTGGAGGGCGGCAATGTGCCGCTGGAGGAATCGATCGCCATCTATGCCCGGGGCGAGGCCCTCAAGGCGCATTGCGACCGCCTGCTCAAGATCGCCGAGGCGAAGGTCGACAAGATCCGCCTCGACGCCGAGGGCAAGCCGGCCGGCACCGAGGCCCTGCCGGAGGCGTGA
PROTEIN sequence
Length: 89
MPNLFPSESTPSDIAALSFEKALAELDQIVKSLEGGNVPLEESIAIYARGEALKAHCDRLLKIAEAKVDKIRLDAEGKPAGTEALPEA*