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berkeley_reactor_200306_biofilm_scaffold_127933_30

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 33390..35318

Top 3 Functional Annotations

Value Algorithm Source
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.3
  • Coverage: 633.0
  • Bit_score: 1059
  • Evalue 0.0
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YQ62_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 83.3
  • Coverage: 633.0
  • Bit_score: 1059
  • Evalue 0.0
1-deoxy-D-xylulose 5-phosphate synthase similarity KEGG
DB: KEGG
  • Identity: 77.3
  • Coverage: 638.0
  • Bit_score: 995
  • Evalue 7.00e-288

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Taxonomy

Microvirga lotononidis → Microvirga → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1929
GTGACCGAATTGGCCGACTCTCCTTCGACTCTCCTGCTTGATACGATCCGGACGCCGGAGGACCTGCGTCGCCTGCCCGAGGAGCAACTGCGCCAGCTCGCCGACGAATTGCGGGCCGAGACGATCGACGCGGTCTCGGTGACCGGCGGCCATCTCGGGGCCGGCCTCGGCGTGATCGAGCTGACCGTCGCCATCCATGCGGTGTTCGACACCCCGCGCGACCGGCTGATCTGGGACGTCGGCCACCAGGCCTATCCGCACAAGATCCTCACCGGCCGGCGCGAGCGGATCCGCACCCTGCGCCAGCCCGGCGGCCTCTCCGGCTTCACCCGGCGCTCGGAGAGCGAATACGACCCGTTCGGCGCGGCCCATTCCTCCACCTCGATCTCGGCCGGCCTCGGCATGGCGGCGGCGCGGGACCTGGAGGGCGGCAAGGGCCATGTGGTGGCGGTGATCGGCGACGGCGCCATGTCGGCCGGCATGGCCTACGAGGCGATGAACAATGCCGGGGCGCTCGGCTCGCGCCTGGTGGTGATCCTCAACGACAACGACATGTCGATCGCCCCGCCGGTGGGCGCGATGTCGGCCTATCTGGCGCGCCTGGTGTCGGGCAGCACCTATACCGGCCTGCGCGGTTGGGCCAAGCATCTCGCCAAGCGCATGCCGAAATTCGTCTACGACAAGGCACGGCGCACCGAGGAATATGCCCGCGGCTTCTGGACCGGCGGCACCATGTTCGAGGAGCTCGGCTTCTACTATGTCGGCCCGATCGACGGGCACAACCTCGACCATCTCCTCCCCGTCCTCAAGAACGTGCGCGACCAGGCCGAAGGCCCGGTCCTGGTGCACGTGGTGACGCAGAAGGGCAAGGGCTACGCCCCGGCCGAGGCGTCCGCCGACAAGTATCACGGCGTGGTCAAGTTCGACGTCGTCACCGGCGCGCAGGTCAAGGCCAAGGCCAATGCGCCGGCCTATACCCGCGTCTTCGGCGAGACGCTGATCAAGGAGGCGCGCAAGGACGACCGCATCGTGGCGATCACCGCGGCGATGCCGTCGGGCACGGGCGTCGACCTGTTCGAGAAGGAGTTCCCGAAGCGCACCTTCGACGTCGGCATCGCCGAGCAGCATGCGGTGACCTTCGCCGCCGGGATGGCGACGGAGGGCTACAAGCCGTTCTGCGCGATCTATTCGACCTTCCTGCAGCGGGCCTACGACCAGGTCGTCCACGACGTGGCGATCCAGAAGCTCGCGGTGCGCTTCCCGATCGACCGGGCCGGCCTGGTGGGCGCGGACGGGGCCACCCATGCCGGCGCCTTCGACGTCGCCTATCTCGCCTGCCTGCCGAACATGGTGGTGATGGCCGCCGCCGACGAGGCGGAGCTGGTGCACATGGTCGCCACCGCGGCGGCCTATGACGAGGGGCCGATCGCCTTCCGCTACCCCCGCGGCGAGGGCGTCGGCGTCGACATGCCGGAATTCGGCACGCCGCTCGCCATCGGCCGCGGCCGGGTGCTGCGCGAGGGCACGCAGGTGGCGCTGCTGTCGCTCGGGACCAGGCTGGCCGAATGCCTGAAGGCGGCCGAGGACCTGGCGGCGTTGGGGCTTTCGGCCACGGTCGCCGACGCGCGCTTCGCCAAGCCGCTCGACGAGGATCTGGTGCTGCGCCTGGCGCGCGAGCACGCGGTGCTGCTGACGGTCGAGGAGGGCTCGGTCGGCGGCTTCGGCAGCCACGTGCTGCAGCTCCTGGCCGAGCGCGGTGCGCTCGACCGCGGCCTGAAGGTGCGGCCGCTGGTGCTGCCGGACCACTTCCTCGACCATGACAAGCCCGAGGCGATGTATGCGCGGGCCGGGCTCGATGCCGCCGGCATCGTCGCCAAGGTGTTCGAGGCGCTCGGTCGCGACGCTGCCGCCCTGCCCAGGCGCGCCTGA
PROTEIN sequence
Length: 643
VTELADSPSTLLLDTIRTPEDLRRLPEEQLRQLADELRAETIDAVSVTGGHLGAGLGVIELTVAIHAVFDTPRDRLIWDVGHQAYPHKILTGRRERIRTLRQPGGLSGFTRRSESEYDPFGAAHSSTSISAGLGMAAARDLEGGKGHVVAVIGDGAMSAGMAYEAMNNAGALGSRLVVILNDNDMSIAPPVGAMSAYLARLVSGSTYTGLRGWAKHLAKRMPKFVYDKARRTEEYARGFWTGGTMFEELGFYYVGPIDGHNLDHLLPVLKNVRDQAEGPVLVHVVTQKGKGYAPAEASADKYHGVVKFDVVTGAQVKAKANAPAYTRVFGETLIKEARKDDRIVAITAAMPSGTGVDLFEKEFPKRTFDVGIAEQHAVTFAAGMATEGYKPFCAIYSTFLQRAYDQVVHDVAIQKLAVRFPIDRAGLVGADGATHAGAFDVAYLACLPNMVVMAAADEAELVHMVATAAAYDEGPIAFRYPRGEGVGVDMPEFGTPLAIGRGRVLREGTQVALLSLGTRLAECLKAAEDLAALGLSATVADARFAKPLDEDLVLRLAREHAVLLTVEEGSVGGFGSHVLQLLAERGALDRGLKVRPLVLPDHFLDHDKPEAMYARAGLDAAGIVAKVFEALGRDAAALPRRA*