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berkeley_reactor_200306_biofilm_scaffold_131415_4

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 1939..2214

Top 3 Functional Annotations

Value Algorithm Source
UPI0003CF8A60 related cluster n=1 Tax=unknown RepID=UPI0003CF8A60 similarity UNIREF
DB: UNIREF100
  • Identity: 79.1
  • Coverage: 91.0
  • Bit_score: 148
  • Evalue 2.00e-33
AbrB family transcriptional regulator {ECO:0000313|EMBL:ESY98501.1}; TaxID=1287226 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC209A00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.1
  • Coverage: 91.0
  • Bit_score: 148
  • Evalue 2.80e-33
AbrB family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 78.0
  • Coverage: 91.0
  • Bit_score: 144
  • Evalue 1.40e-32

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Taxonomy

Mesorhizobium sp. LNHC209A00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 276
ATGGCCGGCGCGGAAAAGCTCGTCACGACCGTCTCGACCAAGGGACAGGTCATCCTGCCCAAGGCCATCCGCCGGCGGCGGGAATGGGAGGCGGGGACACGGCTCCTGGTCGAGGAGATGCCGGAGGGCGTGCTGTTGAGGCGGGCGCCGGCCTTCGACGCGACGCGACCGGAGGACGTCTTCGCGTCGTTGCCATGGACAGGCGAGCCGAAGACCATCGAGGAGATGGAGGCCGGCGTGCTGGCCGAAGCCAGGCGTCGCCATGCTCGCGATTGA
PROTEIN sequence
Length: 92
MAGAEKLVTTVSTKGQVILPKAIRRRREWEAGTRLLVEEMPEGVLLRRAPAFDATRPEDVFASLPWTGEPKTIEEMEAGVLAEARRRHARD*