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berkeley_reactor_200306_biofilm_scaffold_131415_7

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 4340..5314

Top 3 Functional Annotations

Value Algorithm Source
sugar transporter n=1 Tax=Ruegeria conchae RepID=UPI0002378D73 similarity UNIREF
DB: UNIREF100
  • Identity: 64.6
  • Coverage: 328.0
  • Bit_score: 392
  • Evalue 3.70e-106
Ribose/xylose/arabinose/galactoside ABC-type transport system, permease component {ECO:0000313|EMBL:EDQ34922.2}; TaxID=411684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea phototrophica DFL-43.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.1
  • Coverage: 328.0
  • Bit_score: 386
  • Evalue 3.70e-104
sugar ABC transporter similarity KEGG
DB: KEGG
  • Identity: 45.6
  • Coverage: 316.0
  • Bit_score: 280
  • Evalue 4.50e-73

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Taxonomy

Hoeflea phototrophica → Hoeflea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 975
ATGAGCACCACCGCGGACCAGCCCGCGCCGATCGCCTGGACGGTCCGGCGCCTCGGCAATCTGCGCGAGCTGGCGCTGCTCGGCATGATCGCGGCCCTCGTCGCCGGGATGAGCGTGGCCTCGCCCTATTTCCTCACCCTCGCCAATGTCCAGGCGGTGGTGGTCGGGCTGGTGCCGACGGCGATCATCGTGGTCGGCATGACCATCCTGCTGGTCTCCGGCGCCTTCGACCTCTCGGTCGGCTCGGTGCTGGCGCTCGCCAGCACGGTGGTGGCGATCCTGCTGCTGGCCAAGGTGCCGATGCCGCTGGCGATATCAGCCGCCCTGCTGGTCGGGGCGGGCACGGGCCTTGCCAACGGCCTGATCGTCACCGTGCTCGGCGTCAACCCGCTGATCGCGACGCTCGGCACCATGTCGGTAGCGCGCGGGGCGGCGCTGGTCTTCACGGAAGGCTTCTCCCTGTCGGGCCTGCCCGCGGATTTCGGCGTGTTCGGCAAGACGCAGCTCCTCGGCCTGCCCGTCATGGCCTGGATCATGCTCGCCATCGTCGTCGCCGGCGACGTCGCGCTCCGGCGCACGCGCTTCCTGCGCCAAGTCTACTTCATCGGCGGCAACGAGAAGGCGGCGGCGCTGTCGGGCATCCCGGTCAACCGGGTGCGCGTCGCCTGCTTCACGCTCTCCGGGCTGCTGGCCGCCGTGGCCGGGGTGCTGCTGGCCTCGCGCCTGATGAGCGGCACGCCGACCGCCGGCAACGCCCTGGAGCTGCAGGTGCTCGCCGCCGCGGTGATCGGCGGTGCCAGCCTGCGCGGCGGCGAGGGCACCATCTTCGGCGCCGTGCTTGGCGTCGTCTTCGTGGCGCTGATCTCCAACGCGATGACCATGCTGGCCGTGTCGATCTACTGGCAGATGATCGTCACCGGCCTCGTCCTGGTGACCGCGGTGGCCGTCGACATGCTGGGCCGGCGCAAGACCTGA
PROTEIN sequence
Length: 325
MSTTADQPAPIAWTVRRLGNLRELALLGMIAALVAGMSVASPYFLTLANVQAVVVGLVPTAIIVVGMTILLVSGAFDLSVGSVLALASTVVAILLLAKVPMPLAISAALLVGAGTGLANGLIVTVLGVNPLIATLGTMSVARGAALVFTEGFSLSGLPADFGVFGKTQLLGLPVMAWIMLAIVVAGDVALRRTRFLRQVYFIGGNEKAAALSGIPVNRVRVACFTLSGLLAAVAGVLLASRLMSGTPTAGNALELQVLAAAVIGGASLRGGEGTIFGAVLGVVFVALISNAMTMLAVSIYWQMIVTGLVLVTAVAVDMLGRRKT*