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berkeley_reactor_200306_biofilm_scaffold_131415_6

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 2781..4319

Top 3 Functional Annotations

Value Algorithm Source
Ribose import ATP-binding protein RbsA {ECO:0000256|HAMAP-Rule:MF_01716}; EC=3.6.3.17 {ECO:0000256|HAMAP-Rule:MF_01716};; TaxID=862751 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. (strain SirexAA-E / ActE).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.8
  • Coverage: 511.0
  • Bit_score: 412
  • Evalue 4.50e-112
ABC transporter related protein n=1 Tax=Streptomyces sp. SirexAA-E RepID=G2NKR1_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 46.8
  • Coverage: 511.0
  • Bit_score: 412
  • Evalue 3.20e-112
ABC transporter-like protein similarity KEGG
DB: KEGG
  • Identity: 46.8
  • Coverage: 511.0
  • Bit_score: 412
  • Evalue 9.10e-113

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Taxonomy

Streptomyces sp. SirexAA-E → Streptomyces → Streptomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1539
ATGCGCATGGTCGTTTCGCTCCGGGATATCCGGAAATCCTTCGGCGCGACCCGTGCCCTCGACGGCGTTTCCTTCGATCTCGCCGCGGGCGAGGTGCACGCCCTGGTCGGCGAGAACGGCGCCGGCAAGTCGACCCTGATGAATGTCCTGGCCGGCGTGACCCGGCCGGATGACGGCGAGCTCGTCGTCGACGGCGTGGCGCGGGCGTTCCACCGGCCGCAGGACGCCAAGGCCGCCGGCATTGCCACGGTGTTCCAGGAGCTCAGCCTCGTGGAGGGCCTCGGTGTCGCCGAGAATATCTGCGGCAGCCGCGCCCCGGGCCGATTCGGCCTGATCGATCGGGCCGGCCAGCGCGCCCGTGCGGCGGCCGCGATGACAATGCTCGGCGCCTACCTGCCGCCGGACGTGCCGGTCGGGCGGCTCACGGCCAGCGAGCGCCAGCTCGTCGAGGTGGCCAAGGCGCTGGACCAGCTCTTCGCCGCCGGCCGCGGCGACGGCGCGGCGCGGGTGCTGATCCTGGACGAGCCGACCTCGGCGCTCACGCCCGACGAGAAGGCGTCCCTCTTCGCCGCCGTTCGGACCCTGCGCGGCGAGGGTGTCGGCATCGTCTATATCAGCCACCATCTCGACGAGGTGCTGGCGCTCGCCGACCGCATCACCGTGCTGCGCGACGGGGCCACGGTGTGGACGCGGCCGGCGGCCGGGCTCGATGCCGACACGCTGGTCCGCGCCATGGTGGGGCGGGAGGTGCGGCGCGCCGATCGCTCGCGCGGGGCGATGGGGCACGGCGGGGATCGCGCCATGGTGGAGGCCGCCCGCTTCGAGGCGGTCGGCCGGCGCGGCCGGATCGAGGGCGTCTCGCTCAGCCTCCACCATGGCGAGATCCTCGCGGTGGCCGGCCTCGACGGATCGGGACGCGAGAGTCTCGCCCGGCTGCTCGCCGGCCTCGATCGTCCGGATGCGGGCCGGATCACCCTGGCCGGCCGGCGCCATCCCGGCACGCTGCGGGGTGCGATGGCAGTGGGCCTGGGCTATGTCCCCGACGACCGCAAGACGCTCGGCCTGTTCCTGGGCCTTTCCATCGCCGACAACGCCGTGGCGGCCGACCTGAACAGCGTGGCGCGCCGGGGCCTGATGCGGGCCGAGGCAGTGCGGGACGCCGGCGCGGACCTGATCCGCCGTCACGGCGTCAAGGCGGACGGGCCGGCCCGGACCGTCGGGTCGCTCTCGGGCGGCAACCAGCAGAAGGTGCTGTTCGGCAAATGGCTGCGGCGCGAGCCGACGCTGCTCGTGGTCGAGGAGCCGACCAAGGGCGTCGACATCGGCGCCAAGCGCGACATCCACGCGGCGCTGGTCGCCCATGCCAAGGCGGGCGCGGCGGTGCTGGTCGTGTCGTCGGACCTGCCGGAGATCCTCGAGCTGGCGGACCGGATCCTGGTGCTGCGCCGCGGCCGGGTCGCCGGGATCCTCGACGGCGCCACGGCGAGCGAGGAGGCGGTGATGGCGCTCGCCTCCGGCTCGGCCGCCGCGGCCGCATGA
PROTEIN sequence
Length: 513
MRMVVSLRDIRKSFGATRALDGVSFDLAAGEVHALVGENGAGKSTLMNVLAGVTRPDDGELVVDGVARAFHRPQDAKAAGIATVFQELSLVEGLGVAENICGSRAPGRFGLIDRAGQRARAAAAMTMLGAYLPPDVPVGRLTASERQLVEVAKALDQLFAAGRGDGAARVLILDEPTSALTPDEKASLFAAVRTLRGEGVGIVYISHHLDEVLALADRITVLRDGATVWTRPAAGLDADTLVRAMVGREVRRADRSRGAMGHGGDRAMVEAARFEAVGRRGRIEGVSLSLHHGEILAVAGLDGSGRESLARLLAGLDRPDAGRITLAGRRHPGTLRGAMAVGLGYVPDDRKTLGLFLGLSIADNAVAADLNSVARRGLMRAEAVRDAGADLIRRHGVKADGPARTVGSLSGGNQQKVLFGKWLRREPTLLVVEEPTKGVDIGAKRDIHAALVAHAKAGAAVLVVSSDLPEILELADRILVLRRGRVAGILDGATASEEAVMALASGSAAAAA*