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berkeley_reactor_200306_biofilm_scaffold_132711_22

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(17605..18771)

Top 3 Functional Annotations

Value Algorithm Source
Amino acid/amide ABC transporter substrate-binding protein, HAAT family n=3 Tax=Acidiphilium RepID=A5FZN6_ACICJ similarity UNIREF
DB: UNIREF100
  • Identity: 29.1
  • Coverage: 364.0
  • Bit_score: 120
  • Evalue 1.90e-24
Uncharacterized protein {ECO:0000313|EMBL:CDX36192.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.2
  • Coverage: 388.0
  • Bit_score: 671
  • Evalue 4.10e-190
extracellular ligand-binding receptor similarity KEGG
DB: KEGG
  • Identity: 29.1
  • Coverage: 364.0
  • Bit_score: 120
  • Evalue 5.40e-25

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Taxonomy

Mesorhizobium plurifarium → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1167
ATGCGTATTCTCGCGACGACCGTCGCTGTACTTTGCGCCACCACTGTTCTGGCCGGATCGGCGACGAGGGCCGCGGCAGCGGACGACTATCTGATCGGGCTCATCGCCGGCACCACCGGCGCCTATGGCTCCACCGGCATCGCCACGGTCAACGGCGCCACCATGGCGGTCGATGAGATCAATGCCGCCGGCGGGGTCGACGGCCACAAGTTCCGGCTCGAGGCGCACAACGACAACGCGTCTGCGACGCTGTCGGGTCAGCTCTACGAAAAGCTGATCGCTCAGGGCGCGATCGTCATCGCCGGCTCGCCCGACACCGGCCCGGTGACCGCCCAGCTCGCCATGCGGCACAAATTCCCGACCATCGGCGTGGTCGACGACGGCGGCCTCACCGTCAATCCGGACGGGCCGACCAGCCCGCCGAACCCGTGGGTGTTCGACTTCGGCCTCAACACCTTCGCCTGGGGCGAGAAGATCGGCGAATACGCGCTGAAGCATTGCCCCGACGGGCTGGCGGTGCTGCACGACCCGTCGACCTATGGCCAGGGCGGCCTCTTCGGCATCAAGCTCGCCTATGACAAGGCGGGCAAGACCATCGCCATCGACCACACGATCACGGAGAACTGGTCCACCGGCGCGACGGCCGGGCTCATGCCCGAGGTCAATGCCATCAAGGCCGCCGGCATCAAATGCGCCGACGTGTGGCTGACCCCGCAGGACCAGGCCGCGTTCGTGCAGGACATGCATTCGATCAACTATGCAGCCACGGTCTTCGGCAATGACGAGACCAATGCCGACGACACCTATGCCAGCCTGGCCGGCGATCTCGCCCACGGCACGATCAGCGCCATGCTGACCTCGGACCTGCATCCGAGCCCCGAGCTCCAGGCCTTCCGCGACGCCTACAAGAAGCGGTTCAACGTCGAGGCGACGCCCTTCGCCGAAACGAGCTATGACAGCATCAAGATGCTGGCGCAGGTCATCAAGGACACGAAGTCGGTGAAGCCGGCGGACCTGCAGAAGGGCTTCAACGCCGTGCAGGGCTTCAAGGGCCTGTCCGGCGACCTCGGCTTCTCGGAGAAGAACCACATCACGATCAACGCCGAGCAGCTCACGCTCGTCAAATATGACTCCAAGAGCAAGGCCTGGGTCGAGGTGACCGACTAG
PROTEIN sequence
Length: 389
MRILATTVAVLCATTVLAGSATRAAAADDYLIGLIAGTTGAYGSTGIATVNGATMAVDEINAAGGVDGHKFRLEAHNDNASATLSGQLYEKLIAQGAIVIAGSPDTGPVTAQLAMRHKFPTIGVVDDGGLTVNPDGPTSPPNPWVFDFGLNTFAWGEKIGEYALKHCPDGLAVLHDPSTYGQGGLFGIKLAYDKAGKTIAIDHTITENWSTGATAGLMPEVNAIKAAGIKCADVWLTPQDQAAFVQDMHSINYAATVFGNDETNADDTYASLAGDLAHGTISAMLTSDLHPSPELQAFRDAYKKRFNVEATPFAETSYDSIKMLAQVIKDTKSVKPADLQKGFNAVQGFKGLSGDLGFSEKNHITINAEQLTLVKYDSKSKAWVEVTD*